co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G079089

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010216: maintenance of DNA methylation	0.00E+00
2	GO:0032465: regulation of cytokinesis	0.00E+00
3	GO:0010425: DNA methylation on cytosine within a CNG sequence	0.00E+00
4	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
5	GO:0010424: DNA methylation on cytosine within a CG sequence	0.00E+00
6	GO:0010069: zygote asymmetric cytokinesis in embryo sac	0.00E+00
7	GO:0018022: peptidyl-lysine methylation	0.00E+00
8	GO:0007049: cell cycle	1.78E-08
9	GO:0016572: histone phosphorylation	7.63E-08
10	GO:0090116: C-5 methylation of cytosine	2.03E-07
11	GO:0051567: histone H3-K9 methylation	2.79E-06
12	GO:0006306: DNA methylation	3.87E-06
13	GO:0043987: histone H3-S10 phosphorylation	4.82E-06
14	GO:0045814: negative regulation of gene expression, epigenetic	4.82E-06
15	GO:0006342: chromatin silencing	7.19E-06
16	GO:0007018: microtubule-based movement	9.29E-06
17	GO:0010389: regulation of G2/M transition of mitotic cell cycle	2.99E-05
18	GO:0006260: DNA replication	4.42E-05
19	GO:0009294: DNA mediated transformation	5.08E-05
20	GO:0051301: cell division	1.18E-04
21	GO:0000226: microtubule cytoskeleton organization	3.26E-04
22	GO:0007059: chromosome segregation	3.58E-04
23	GO:0009652: thigmotropism	3.58E-04
24	GO:0000911: cytokinesis by cell plate formation	6.75E-04
25	GO:0016571: histone methylation	7.60E-04
26	GO:0009956: radial pattern formation	8.41E-04
27	GO:0009755: hormone-mediated signaling pathway	8.41E-04
28	GO:0022904: respiratory electron transport chain	1.42E-03
29	GO:0009957: epidermal cell fate specification	1.42E-03
30	GO:0009966: regulation of signal transduction	1.58E-03
31	GO:0008356: asymmetric cell division	2.07E-03
32	GO:0032147: activation of protein kinase activity	2.07E-03
33	GO:0032875: regulation of DNA endoreduplication	2.77E-03
34	GO:0006265: DNA topological change	2.77E-03
35	GO:0060236: regulation of mitotic spindle organization	2.77E-03
36	GO:0009909: regulation of flower development	2.91E-03
37	GO:0006275: regulation of DNA replication	3.18E-03
38	GO:0006270: DNA replication initiation	3.48E-03
39	GO:0010087: phloem or xylem histogenesis	3.60E-03
40	GO:0009934: regulation of meristem structural organization	4.50E-03
41	GO:0010583: response to cyclopentenone	4.50E-03
42	GO:0006349: regulation of gene expression by genetic imprinting	4.50E-03
43	GO:0055072: iron ion homeostasis	4.50E-03
44	GO:0010074: maintenance of meristem identity	5.43E-03
45	GO:0048449: floral organ formation	5.43E-03
46	GO:0006281: DNA repair	6.30E-03
47	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.45E-03
48	GO:0009958: positive gravitropism	8.66E-03
49	GO:0006259: DNA metabolic process	8.66E-03
50	GO:0016570: histone modification	8.66E-03
51	GO:0048453: sepal formation	8.66E-03
52	GO:0010048: vernalization response	8.66E-03
53	GO:0006284: base-excision repair	8.66E-03
54	GO:0048451: petal formation	9.86E-03
55	GO:0006974: cellular response to DNA damage stimulus	9.86E-03
56	GO:0051225: spindle assembly	9.86E-03
57	GO:0019915: lipid storage	9.86E-03
58	GO:0032508: DNA duplex unwinding	1.11E-02
59	GO:0007034: vacuolar transport	1.11E-02
60	GO:0006406: mRNA export from nucleus	1.24E-02
61	GO:0006289: nucleotide-excision repair	1.24E-02
62	GO:0048316: seed development	1.24E-02
63	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.38E-02
64	GO:0010162: seed dormancy process	1.38E-02
65	GO:0050826: response to freezing	1.52E-02
66	GO:0007062: sister chromatid cohesion	1.52E-02
67	GO:0034968: histone lysine methylation	1.66E-02
68	GO:0006310: DNA recombination	1.81E-02
69	GO:0044267: cellular protein metabolic process	1.81E-02
70	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.97E-02
71	GO:0009910: negative regulation of flower development	2.13E-02
72	GO:0010182: sugar mediated signaling pathway	2.13E-02
73	GO:0032259: methylation	2.18E-02
74	GO:0000278: mitotic cell cycle	2.29E-02
75	GO:0009553: embryo sac development	2.29E-02
76	GO:0009845: seed germination	2.64E-02
77	GO:0031047: gene silencing by RNA	2.82E-02
78	GO:0009933: meristem structural organization	3.00E-02
79	GO:0016567: protein ubiquitination	3.30E-02
80	GO:0016579: protein deubiquitination	3.57E-02
81	GO:0048366: leaf development	3.77E-02
82	GO:0006511: ubiquitin-dependent protein catabolic process	3.82E-02
83	GO:0051726: regulation of cell cycle	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0008409: 5'-3' exonuclease activity	0.00E+00
2	GO:0046974: histone methyltransferase activity (H3-K9 specific)	0.00E+00
3	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	2.03E-07
4	GO:0008017: microtubule binding	2.00E-06
5	GO:0035175: histone kinase activity (H3-S10 specific)	4.82E-06
6	GO:0003777: microtubule motor activity	9.29E-06
7	GO:0003916: DNA topoisomerase activity	3.58E-04
8	GO:0008327: methyl-CpG binding	3.58E-04
9	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.58E-04
10	GO:0010428: methyl-CpNpG binding	3.58E-04
11	GO:0010429: methyl-CpNpN binding	3.58E-04
12	GO:0017108: 5'-flap endonuclease activity	3.58E-04
13	GO:0070628: proteasome binding	1.42E-03
14	GO:0010385: double-stranded methylated DNA binding	1.42E-03
15	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.07E-03
16	GO:0043130: ubiquitin binding	5.43E-03
17	GO:0008168: methyltransferase activity	6.73E-03
18	GO:0003684: damaged DNA binding	8.66E-03
19	GO:0004518: nuclease activity	8.66E-03
20	GO:0003678: DNA helicase activity	8.66E-03
21	GO:0018024: histone-lysine N-methyltransferase activity	9.86E-03
22	GO:0004519: endonuclease activity	1.11E-02
23	GO:0004527: exonuclease activity	1.38E-02
24	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.52E-02
25	GO:0019901: protein kinase binding	1.52E-02
26	GO:0005524: ATP binding	2.08E-02
27	GO:0042393: histone binding	2.46E-02
28	GO:0051082: unfolded protein binding	2.81E-02
29	GO:0003682: chromatin binding	3.72E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005819: spindle	6.35E-06
3	GO:0005874: microtubule	6.86E-06
4	GO:0005871: kinesin complex	8.12E-06
5	GO:0000815: ESCRT III complex	3.58E-04
6	GO:0005875: microtubule associated complex	5.07E-04
7	GO:0005815: microtubule organizing center	1.42E-03
8	GO:0000775: chromosome, centromeric region	1.42E-03
9	GO:0005876: spindle microtubule	2.07E-03
10	GO:0010005: cortical microtubule, transverse to long axis	3.60E-03
11	GO:0009574: preprophase band	3.60E-03
12	GO:0016272: prefoldin complex	5.43E-03
13	GO:0016604: nuclear body	5.43E-03
14	GO:0042555: MCM complex	6.45E-03
15	GO:0005634: nucleus	1.03E-02
16	GO:0005654: nucleoplasm	1.81E-02
17	GO:0031966: mitochondrial membrane	1.81E-02
18	GO:0019013: viral nucleocapsid	2.13E-02
19	GO:0005635: nuclear envelope	2.64E-02
20	GO:0009524: phragmoplast	3.57E-02
21	GO:0005694: chromosome	3.93E-02