co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G078725

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030497: fatty acid elongation	5.63E-06
2	GO:0009658: chloroplast organization	1.09E-05
3	GO:0045037: protein import into chloroplast stroma	1.32E-05
4	GO:0010072: primary shoot apical meristem specification	2.51E-05
5	GO:0006633: fatty acid biosynthetic process	1.64E-04
6	GO:0006430: lysyl-tRNA aminoacylation	1.86E-04
7	GO:0051512: positive regulation of unidimensional cell growth	1.86E-04
8	GO:0010587: miRNA catabolic process	1.86E-04
9	GO:0009968: negative regulation of signal transduction	1.86E-04
10	GO:0043157: response to cation stress	1.86E-04
11	GO:0018160: peptidyl-pyrromethane cofactor linkage	1.86E-04
12	GO:0080141: regulation of jasmonic acid biosynthetic process	1.86E-04
13	GO:0010380: regulation of chlorophyll biosynthetic process	4.51E-04
14	GO:1901671: positive regulation of superoxide dismutase activity	4.51E-04
15	GO:0000304: response to singlet oxygen	7.69E-04
16	GO:0006571: tyrosine biosynthetic process	7.69E-04
17	GO:0048367: shoot system development	8.99E-04
18	GO:0006790: sulfur compound metabolic process	1.14E-03
19	GO:0010417: glucuronoxylan biosynthetic process	1.14E-03
20	GO:0006401: RNA catabolic process	1.14E-03
21	GO:0009933: meristem structural organization	1.33E-03
22	GO:0006081: cellular aldehyde metabolic process	1.55E-03
23	GO:0009735: response to cytokinin	1.58E-03
24	GO:0033014: tetrapyrrole biosynthetic process	2.43E-03
25	GO:0010206: photosystem II repair	2.43E-03
26	GO:0019538: protein metabolic process	2.43E-03
27	GO:0009628: response to abiotic stimulus	2.93E-03
28	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.48E-03
29	GO:0009834: plant-type secondary cell wall biogenesis	4.06E-03
30	GO:0006508: proteolysis	4.15E-03
31	GO:0048364: root development	4.56E-03
32	GO:0045492: xylan biosynthetic process	5.29E-03
33	GO:0046854: phosphatidylinositol phosphorylation	5.96E-03
34	GO:0031408: oxylipin biosynthetic process	6.66E-03
35	GO:0042793: transcription from plastid promoter	6.66E-03
36	GO:0005982: starch metabolic process	7.38E-03
37	GO:0006457: protein folding	8.67E-03
38	GO:0044267: cellular protein metabolic process	9.70E-03
39	GO:0008152: metabolic process	9.73E-03
40	GO:0035304: regulation of protein dephosphorylation	1.14E-02
41	GO:0009738: abscisic acid-activated signaling pathway	1.31E-02
42	GO:0009902: chloroplast relocation	1.60E-02
43	GO:0030163: protein catabolic process	1.69E-02
44	GO:0048573: photoperiodism, flowering	1.80E-02
45	GO:0043086: negative regulation of catalytic activity	2.45E-02
46	GO:0006418: tRNA aminoacylation for protein translation	2.68E-02
47	GO:0009793: embryo development ending in seed dormancy	2.97E-02
48	GO:0030244: cellulose biosynthetic process	3.17E-02
49	GO:0015995: chlorophyll biosynthetic process	3.30E-02
50	GO:0030001: metal ion transport	3.55E-02
51	GO:0007165: signal transduction	3.65E-02
52	GO:0010207: photosystem II assembly	4.24E-02
53	GO:0045893: positive regulation of transcription, DNA-templated	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
2	GO:0003989: acetyl-CoA carboxylase activity	0.00E+00
3	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
4	GO:0004075: biotin carboxylase activity	1.50E-06
5	GO:0004252: serine-type endopeptidase activity	8.26E-05
6	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.86E-04
7	GO:0031177: phosphopantetheine binding	1.86E-04
8	GO:0004824: lysine-tRNA ligase activity	1.86E-04
9	GO:0004418: hydroxymethylbilane synthase activity	1.86E-04
10	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	1.86E-04
11	GO:0008977: prephenate dehydrogenase (NAD+) activity	4.51E-04
12	GO:0004665: prephenate dehydrogenase (NADP+) activity	4.51E-04
13	GO:0019204: obsolete nucleotide phosphatase activity	4.51E-04
14	GO:0015020: glucuronosyltransferase activity	7.69E-04
15	GO:0080116: glucuronoxylan glucuronosyltransferase activity	7.69E-04
16	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.14E-03
17	GO:0046914: transition metal ion binding	4.67E-03
18	GO:0048037: cofactor binding	5.29E-03
19	GO:0016760: cellulose synthase (UDP-forming) activity	7.38E-03
20	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	8.90E-03
21	GO:0008233: peptidase activity	9.95E-03
22	GO:0042802: identical protein binding	1.69E-02
23	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.90E-02
24	GO:0008236: serine-type peptidase activity	2.01E-02
25	GO:0004812: aminoacyl-tRNA ligase activity	2.92E-02
26	GO:0016757: transferase activity, transferring glycosyl groups	3.72E-02
27	GO:0016874: ligase activity	4.01E-02
28	GO:0016746: transferase activity, transferring acyl groups	4.10E-02
29	GO:0051287: NAD binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0009941: chloroplast envelope	2.38E-07
2	GO:0009507: chloroplast	7.75E-05
3	GO:0009532: plastid stroma	8.89E-05
4	GO:0009570: chloroplast stroma	1.37E-04
5	GO:0009533: chloroplast stromal thylakoid	4.51E-04
6	GO:0009706: chloroplast inner membrane	1.11E-03
7	GO:0009840: chloroplastic endopeptidase Clp complex	1.55E-03
8	GO:0009535: chloroplast thylakoid membrane	5.50E-03
9	GO:0009579: thylakoid	9.29E-03
10	GO:0009505: plant-type cell wall	3.51E-02