co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G077333

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051188: cofactor biosynthetic process	0.00E+00
2	GO:0042550: photosystem I stabilization	0.00E+00
3	GO:2000505: regulation of energy homeostasis	0.00E+00
4	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
5	GO:0042221: response to chemical	0.00E+00
6	GO:0030243: cellulose metabolic process	0.00E+00
7	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
8	GO:0055070: copper ion homeostasis	0.00E+00
9	GO:0015979: photosynthesis	9.11E-14
10	GO:0070838: divalent metal ion transport	7.37E-10
11	GO:0030003: cellular cation homeostasis	6.58E-09
12	GO:0015995: chlorophyll biosynthetic process	7.48E-08
13	GO:0016117: carotenoid biosynthetic process	3.42E-07
14	GO:0006098: pentose-phosphate shunt	1.51E-06
15	GO:0009773: photosynthetic electron transport in photosystem I	1.94E-06
16	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.73E-06
17	GO:0010207: photosystem II assembly	5.78E-06
18	GO:0006814: sodium ion transport	7.56E-06
19	GO:0009637: response to blue light	1.17E-05
20	GO:0010027: thylakoid membrane organization	1.39E-05
21	GO:0019252: starch biosynthetic process	1.53E-05
22	GO:0010114: response to red light	1.60E-05
23	GO:0010218: response to far red light	2.14E-05
24	GO:0000023: maltose metabolic process	2.46E-05
25	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.65E-05
26	GO:0009772: photosynthetic electron transport in photosystem II	4.37E-05
27	GO:0043085: positive regulation of catalytic activity	6.97E-05
28	GO:0015986: ATP synthesis coupled proton transport	8.39E-05
29	GO:0006364: rRNA processing	9.79E-05
30	GO:0009902: chloroplast relocation	1.51E-04
31	GO:0019676: ammonia assimilation cycle	2.62E-04
32	GO:0019761: glucosinolate biosynthetic process	2.75E-04
33	GO:0016556: mRNA modification	3.27E-04
34	GO:0006875: cellular metal ion homeostasis	6.18E-04
35	GO:0009624: response to nematode	6.64E-04
36	GO:0009966: regulation of signal transduction	1.01E-03
37	GO:0010155: regulation of proton transport	1.01E-03
38	GO:0051289: protein homotetramerization	1.06E-03
39	GO:0019760: glucosinolate metabolic process	1.06E-03
40	GO:0010103: stomatal complex morphogenesis	1.14E-03
41	GO:0050821: protein stabilization	1.55E-03
42	GO:0016485: protein processing	1.55E-03
43	GO:0006782: protoporphyrinogen IX biosynthetic process	1.55E-03
44	GO:0051260: protein homooligomerization	1.55E-03
45	GO:0009595: detection of biotic stimulus	1.55E-03
46	GO:0045037: protein import into chloroplast stroma	1.55E-03
47	GO:0006014: D-ribose metabolic process	1.55E-03
48	GO:0006796: phosphate-containing compound metabolic process	2.08E-03
49	GO:0000096: sulfur amino acid metabolic process	2.08E-03
50	GO:0043900: regulation of multi-organism process	2.08E-03
51	GO:0034755: iron ion transmembrane transport	2.08E-03
52	GO:0046688: response to copper ion	2.65E-03
53	GO:0017148: negative regulation of translation	2.65E-03
54	GO:0006783: heme biosynthetic process	2.65E-03
55	GO:0055114: oxidation-reduction process	2.78E-03
56	GO:0034660: ncRNA metabolic process	3.31E-03
57	GO:0009106: lipoate metabolic process	3.31E-03
58	GO:0006766: vitamin metabolic process	3.31E-03
59	GO:0009411: response to UV	3.31E-03
60	GO:0009108: coenzyme biosynthetic process	3.31E-03
61	GO:0033014: tetrapyrrole biosynthetic process	3.31E-03
62	GO:0005985: sucrose metabolic process	4.02E-03
63	GO:0046939: nucleotide phosphorylation	4.02E-03
64	GO:0010310: regulation of hydrogen peroxide metabolic process	4.02E-03
65	GO:0015977: carbon fixation	4.77E-03
66	GO:0009072: aromatic amino acid family metabolic process	4.77E-03
67	GO:0009832: plant-type cell wall biogenesis	5.55E-03
68	GO:0006354: DNA-templated transcription, elongation	6.38E-03
69	GO:0006006: glucose metabolic process	6.38E-03
70	GO:0009697: salicylic acid biosynthetic process	6.38E-03
71	GO:0006754: ATP biosynthetic process	6.38E-03
72	GO:0006546: glycine catabolic process	7.27E-03
73	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.27E-03
74	GO:0009765: photosynthesis, light harvesting	7.27E-03
75	GO:0006779: porphyrin-containing compound biosynthetic process	7.27E-03
76	GO:0009409: response to cold	8.02E-03
77	GO:0042793: transcription from plastid promoter	9.13E-03
78	GO:0006108: malate metabolic process	9.13E-03
79	GO:0009767: photosynthetic electron transport chain	9.13E-03
80	GO:0006636: unsaturated fatty acid biosynthetic process	1.01E-02
81	GO:0016049: cell growth	1.11E-02
82	GO:0006833: water transport	1.11E-02
83	GO:0009750: response to fructose	1.11E-02
84	GO:0009416: response to light stimulus	1.17E-02
85	GO:0015992: proton transport	1.22E-02
86	GO:0009657: plastid organization	1.22E-02
87	GO:0016126: sterol biosynthetic process	1.22E-02
88	GO:0019684: photosynthesis, light reaction	1.22E-02
89	GO:0018298: protein-chromophore linkage	1.33E-02
90	GO:0006612: protein targeting to membrane	1.45E-02
91	GO:0010200: response to chitin	1.45E-02
92	GO:0010193: response to ozone	1.45E-02
93	GO:0046777: protein autophosphorylation	1.56E-02
94	GO:0010363: regulation of plant-type hypersensitive response	1.56E-02
95	GO:0035304: regulation of protein dephosphorylation	1.56E-02
96	GO:0006139: nucleobase-containing compound metabolic process	1.56E-02
97	GO:0031348: negative regulation of defense response	1.68E-02
98	GO:0009695: jasmonic acid biosynthetic process	1.68E-02
99	GO:0009867: jasmonic acid mediated signaling pathway	1.68E-02
100	GO:0009817: defense response to fungus, incompatible interaction	1.68E-02
101	GO:0042742: defense response to bacterium	1.77E-02
102	GO:0009853: photorespiration	2.07E-02
103	GO:0000165: MAPK cascade	2.20E-02
104	GO:0000413: protein peptidyl-prolyl isomerization	2.20E-02
105	GO:0006096: glycolytic process	2.33E-02
106	GO:0009735: response to cytokinin	2.48E-02
107	GO:0019344: cysteine biosynthetic process	2.76E-02
108	GO:0006811: ion transport	2.91E-02
109	GO:0043086: negative regulation of catalytic activity	3.37E-02
110	GO:0009658: chloroplast organization	3.69E-02
111	GO:0009744: response to sucrose	4.03E-02
112	GO:0008652: cellular amino acid biosynthetic process	4.55E-02
113	GO:0006812: cation transport	4.55E-02
114	GO:0009644: response to high light intensity	4.72E-02
115	GO:0022900: electron transport chain	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
2	GO:0045550: geranylgeranyl reductase activity	0.00E+00
3	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
4	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
5	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
6	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
7	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
8	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.18E-06
9	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.06E-05
10	GO:0016168: chlorophyll binding	4.87E-05
11	GO:0015140: malate transmembrane transporter activity	2.62E-04
12	GO:0008883: glutamyl-tRNA reductase activity	2.62E-04
13	GO:0004618: phosphoglycerate kinase activity	2.62E-04
14	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.62E-04
15	GO:0015088: copper uptake transmembrane transporter activity	2.62E-04
16	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	6.18E-04
17	GO:0051920: peroxiredoxin activity	6.18E-04
18	GO:0004713: protein tyrosine kinase activity	7.74E-04
19	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	1.06E-03
20	GO:0051287: NAD binding	1.36E-03
21	GO:0071949: FAD binding	1.55E-03
22	GO:0004332: fructose-bisphosphate aldolase activity	1.55E-03
23	GO:0004747: ribokinase activity	1.55E-03
24	GO:0016984: ribulose-bisphosphate carboxylase activity	1.55E-03
25	GO:0016209: antioxidant activity	1.55E-03
26	GO:0004017: adenylate kinase activity	2.08E-03
27	GO:0005381: iron ion transmembrane transporter activity	2.08E-03
28	GO:0004470: malic enzyme activity	2.08E-03
29	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	3.31E-03
30	GO:0019201: nucleotide kinase activity	3.31E-03
31	GO:0019205: nucleobase-containing compound kinase activity	3.31E-03
32	GO:0005215: transporter activity	3.49E-03
33	GO:0016776: phosphotransferase activity, phosphate group as acceptor	4.77E-03
34	GO:0004427: inorganic diphosphatase activity	4.77E-03
35	GO:0042578: phosphoric ester hydrolase activity	4.77E-03
36	GO:0008266: poly(U) RNA binding	4.77E-03
37	GO:0050661: NADP binding	5.18E-03
38	GO:0042803: protein homodimerization activity	6.81E-03
39	GO:0048037: cofactor binding	7.27E-03
40	GO:0003690: double-stranded DNA binding	7.27E-03
41	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.01E-02
42	GO:0009055: electron carrier activity	1.01E-02
43	GO:0008080: N-acetyltransferase activity	1.22E-02
44	GO:0030145: manganese ion binding	1.22E-02
45	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.27E-02
46	GO:0015297: antiporter activity	1.56E-02
47	GO:0051537: 2 iron, 2 sulfur cluster binding	1.68E-02
48	GO:0015078: hydrogen ion transmembrane transporter activity	1.81E-02
49	GO:0016597: amino acid binding	2.07E-02
50	GO:0042802: identical protein binding	2.33E-02
51	GO:0051539: 4 iron, 4 sulfur cluster binding	2.33E-02
52	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.48E-02
53	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.62E-02
54	GO:0045735: nutrient reservoir activity	2.76E-02
55	GO:0008236: serine-type peptidase activity	2.76E-02
56	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.91E-02
57	GO:0016829: lyase activity	3.07E-02
58	GO:0005198: structural molecule activity	3.22E-02
59	GO:0005516: calmodulin binding	3.86E-02

Rank	GO Term	Adjusted P value
1	GO:0009512: cytochrome b6f complex	0.00E+00
2	GO:0009507: chloroplast	2.87E-22
3	GO:0009941: chloroplast envelope	3.95E-16
4	GO:0009535: chloroplast thylakoid membrane	5.72E-15
5	GO:0009579: thylakoid	2.27E-10
6	GO:0031977: thylakoid lumen	1.53E-08
7	GO:0009522: photosystem I	3.46E-08
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.11E-07
9	GO:0009534: chloroplast thylakoid	2.30E-06
10	GO:0048046: apoplast	1.12E-05
11	GO:0009570: chloroplast stroma	2.11E-05
12	GO:0010287: plastoglobule	5.10E-05
13	GO:0016020: membrane	7.02E-05
14	GO:0009706: chloroplast inner membrane	1.14E-04
15	GO:0009523: photosystem II	1.96E-04
16	GO:0030093: chloroplast photosystem I	2.62E-04
17	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.62E-04
18	GO:0010319: stromule	3.05E-04
19	GO:0009543: chloroplast thylakoid lumen	5.72E-04
20	GO:0009533: chloroplast stromal thylakoid	6.18E-04
21	GO:0009538: photosystem I reaction center	1.55E-03
22	GO:0009508: plastid chromosome	2.08E-03
23	GO:0019898: extrinsic component of membrane	2.65E-03
24	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	3.31E-03
25	GO:0009654: photosystem II oxygen evolving complex	3.31E-03
26	GO:0009295: nucleoid	7.27E-03
27	GO:0042651: thylakoid membrane	9.13E-03
28	GO:0009536: plastid	2.15E-02