Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G075408

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0060148: positive regulation of posttranscriptional gene silencing0.00E+00
2GO:0009150: purine ribonucleotide metabolic process0.00E+00
3GO:0006790: sulfur compound metabolic process1.04E-05
4GO:0051512: positive regulation of unidimensional cell growth1.61E-04
5GO:0019932: second-messenger-mediated signaling1.61E-04
6GO:0009168: purine ribonucleoside monophosphate biosynthetic process1.61E-04
7GO:0051028: mRNA transport1.61E-04
8GO:0010587: miRNA catabolic process1.61E-04
9GO:0032264: IMP salvage1.61E-04
10GO:0009968: negative regulation of signal transduction1.61E-04
11GO:0043157: response to cation stress1.61E-04
12GO:0045292: mRNA cis splicing, via spliceosome1.61E-04
13GO:0048574: long-day photoperiodism, flowering1.61E-04
14GO:0007112: male meiosis cytokinesis1.61E-04
15GO:0080141: regulation of jasmonic acid biosynthetic process1.61E-04
16GO:0009688: abscisic acid biosynthetic process3.93E-04
17GO:0016125: sterol metabolic process3.93E-04
18GO:0030643: cellular phosphate ion homeostasis3.93E-04
19GO:0045727: positive regulation of translation6.74E-04
20GO:0006188: IMP biosynthetic process6.74E-04
21GO:0006401: RNA catabolic process1.00E-03
22GO:0031053: primary miRNA processing1.00E-03
23GO:0000165: MAPK cascade1.10E-03
24GO:0030422: production of siRNA involved in RNA interference2.15E-03
25GO:0010025: wax biosynthetic process2.15E-03
26GO:0006366: transcription from RNA polymerase II promoter2.15E-03
27GO:0010310: regulation of hydrogen peroxide metabolic process2.57E-03
28GO:0009615: response to virus2.57E-03
29GO:0009628: response to abiotic stimulus2.57E-03
30GO:0010311: lateral root formation2.57E-03
31GO:0006002: fructose 6-phosphate metabolic process3.04E-03
32GO:0006342: chromatin silencing3.04E-03
33GO:0016070: RNA metabolic process4.09E-03
34GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.65E-03
35GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.65E-03
36GO:0019915: lipid storage4.65E-03
37GO:0046854: phosphatidylinositol phosphorylation5.22E-03
38GO:0010389: regulation of G2/M transition of mitotic cell cycle5.22E-03
39GO:0006289: nucleotide-excision repair5.83E-03
40GO:0051607: defense response to virus5.83E-03
41GO:0006260: DNA replication6.38E-03
42GO:0010162: seed dormancy process6.46E-03
43GO:0006446: regulation of translational initiation6.46E-03
44GO:0016049: cell growth7.12E-03
45GO:0050826: response to freezing7.12E-03
46GO:0001731: formation of translation preinitiation complex7.12E-03
47GO:0000902: cell morphogenesis7.79E-03
48GO:0016126: sterol biosynthetic process7.79E-03
49GO:0006310: DNA recombination8.48E-03
50GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.21E-03
51GO:0006612: protein targeting to membrane9.21E-03
52GO:0035304: regulation of protein dephosphorylation9.95E-03
53GO:0010182: sugar mediated signaling pathway9.95E-03
54GO:0010363: regulation of plant-type hypersensitive response9.95E-03
55GO:0009867: jasmonic acid mediated signaling pathway1.07E-02
56GO:0031348: negative regulation of defense response1.07E-02
57GO:0009751: response to salicylic acid1.15E-02
58GO:0009738: abscisic acid-activated signaling pathway1.15E-02
59GO:0035556: intracellular signal transduction1.23E-02
60GO:0009845: seed germination1.23E-02
61GO:0006511: ubiquitin-dependent protein catabolic process1.29E-02
62GO:0031047: gene silencing by RNA1.31E-02
63GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation1.31E-02
64GO:0009933: meristem structural organization1.40E-02
65GO:0006275: regulation of DNA replication1.40E-02
66GO:0000226: microtubule cytoskeleton organization1.48E-02
67GO:0048573: photoperiodism, flowering1.57E-02
68GO:0048193: Golgi vesicle transport1.57E-02
69GO:0016579: protein deubiquitination1.66E-02
70GO:0009086: methionine biosynthetic process1.75E-02
71GO:0006486: protein glycosylation1.85E-02
72GO:0000911: cytokinesis by cell plate formation2.14E-02
73GO:0051567: histone H3-K9 methylation2.24E-02
74GO:0009617: response to bacterium2.34E-02
75GO:0009640: photomorphogenesis2.34E-02
76GO:0006306: DNA methylation2.45E-02
77GO:0009793: embryo development ending in seed dormancy2.46E-02
78GO:0000398: mRNA splicing, via spliceosome2.66E-02
79GO:0007275: multicellular organism development3.46E-02
80GO:0009737: response to abscisic acid4.03E-02
81GO:0050832: defense response to fungus4.20E-02
82GO:0009416: response to light stimulus4.72E-02
83GO:0009909: regulation of flower development4.72E-02
84GO:0006413: translational initiation4.99E-02
RankGO TermAdjusted P value
1GO:0032942: inositol tetrakisphosphate 2-kinase activity0.00E+00
2GO:0035299: inositol pentakisphosphate 2-kinase activity1.61E-04
3GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.61E-04
4GO:0004708: MAP kinase kinase activity1.61E-04
5GO:0000339: RNA cap binding1.61E-04
6GO:0003968: RNA-directed 5'-3' RNA polymerase activity1.61E-04
7GO:0047627: adenylylsulfatase activity1.61E-04
8GO:0031625: ubiquitin protein ligase binding1.61E-04
9GO:0000248: C-5 sterol desaturase activity1.61E-04
10GO:0000247: C-8 sterol isomerase activity1.61E-04
11GO:0047750: cholestenol delta-isomerase activity1.61E-04
12GO:0004435: phosphatidylinositol phospholipase C activity1.61E-04
13GO:0003876: AMP deaminase activity1.61E-04
14GO:0019239: deaminase activity3.93E-04
15GO:0008430: selenium binding3.93E-04
16GO:0019204: obsolete nucleotide phosphatase activity3.93E-04
17GO:0070628: proteasome binding6.74E-04
18GO:0043130: ubiquitin binding2.57E-03
19GO:0043022: ribosome binding2.57E-03
20GO:0004843: thiol-dependent ubiquitin-specific protease activity3.04E-03
21GO:0003872: 6-phosphofructokinase activity3.56E-03
22GO:0004180: carboxypeptidase activity3.56E-03
23GO:0008378: galactosyltransferase activity4.09E-03
24GO:0003684: damaged DNA binding4.09E-03
25GO:0036459: thiol-dependent ubiquitinyl hydrolase activity7.79E-03
26GO:0004185: serine-type carboxypeptidase activity9.21E-03
27GO:0004721: phosphoprotein phosphatase activity3.58E-02
28GO:0005215: transporter activity3.63E-02
RankGO TermAdjusted P value
1GO:0005846: nuclear cap binding complex1.61E-04
2GO:0031461: cullin-RING ubiquitin ligase complex1.61E-04
3GO:0005732: small nucleolar ribonucleoprotein complex1.36E-03
4GO:0005945: 6-phosphofructokinase complex3.04E-03
5GO:0016282: eukaryotic 43S preinitiation complex7.12E-03
6GO:0033290: eukaryotic 48S preinitiation complex7.12E-03
7GO:0005852: eukaryotic translation initiation factor 3 complex7.79E-03
8GO:0009524: phragmoplast1.66E-02
9GO:0005783: endoplasmic reticulum3.26E-02
10GO:0009506: plasmodesma4.59E-02