co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G074393

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
2	GO:0042549: photosystem II stabilization	0.00E+00
3	GO:0030243: cellulose metabolic process	0.00E+00
4	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
5	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
6	GO:0042550: photosystem I stabilization	0.00E+00
7	GO:2000505: regulation of energy homeostasis	0.00E+00
8	GO:0015979: photosynthesis	1.94E-22
9	GO:0010207: photosystem II assembly	4.87E-16
10	GO:0043085: positive regulation of catalytic activity	1.75E-11
11	GO:0009773: photosynthetic electron transport in photosystem I	3.16E-11
12	GO:0006364: rRNA processing	4.61E-10
13	GO:0035304: regulation of protein dephosphorylation	2.30E-09
14	GO:0006098: pentose-phosphate shunt	1.86E-08
15	GO:0009657: plastid organization	4.72E-08
16	GO:0019252: starch biosynthetic process	1.76E-07
17	GO:0070838: divalent metal ion transport	6.52E-07
18	GO:0009772: photosynthetic electron transport in photosystem II	6.52E-07
19	GO:0009637: response to blue light	1.28E-06
20	GO:0016117: carotenoid biosynthetic process	1.28E-06
21	GO:0010114: response to red light	1.90E-06
22	GO:0010218: response to far red light	2.73E-06
23	GO:0030003: cellular cation homeostasis	2.86E-06
24	GO:0000023: maltose metabolic process	3.26E-06
25	GO:0015986: ATP synthesis coupled proton transport	7.20E-06
26	GO:0042742: defense response to bacterium	8.06E-06
27	GO:0006814: sodium ion transport	1.75E-05
28	GO:0009765: photosynthesis, light harvesting	2.45E-05
29	GO:0019344: cysteine biosynthetic process	3.28E-05
30	GO:0009595: detection of biotic stimulus	4.33E-05
31	GO:0010196: nonphotochemical quenching	4.33E-05
32	GO:0010027: thylakoid membrane organization	4.63E-05
33	GO:0043900: regulation of multi-organism process	7.95E-05
34	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.50E-05
35	GO:0010155: regulation of proton transport	1.06E-04
36	GO:0018298: protein-chromophore linkage	1.06E-04
37	GO:0009624: response to nematode	1.32E-04
38	GO:0015995: chlorophyll biosynthetic process	1.32E-04
39	GO:0046777: protein autophosphorylation	1.51E-04
40	GO:0009409: response to cold	2.47E-04
41	GO:0010310: regulation of hydrogen peroxide metabolic process	2.62E-04
42	GO:0071482: cellular response to light stimulus	3.74E-04
43	GO:0009590: detection of gravity	3.74E-04
44	GO:0009768: photosynthesis, light harvesting in photosystem I	3.74E-04
45	GO:0019676: ammonia assimilation cycle	3.74E-04
46	GO:0019761: glucosinolate biosynthetic process	5.50E-04
47	GO:0009697: salicylic acid biosynthetic process	5.53E-04
48	GO:0006754: ATP biosynthetic process	5.53E-04
49	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.74E-04
50	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.76E-04
51	GO:0006875: cellular metal ion homeostasis	8.76E-04
52	GO:0010236: plastoquinone biosynthetic process	8.76E-04
53	GO:0006636: unsaturated fatty acid biosynthetic process	1.12E-03
54	GO:0015992: proton transport	1.47E-03
55	GO:0019760: glucosinolate metabolic process	1.48E-03
56	GO:0006733: oxidoreduction coenzyme metabolic process	1.48E-03
57	GO:0009664: plant-type cell wall organization	1.67E-03
58	GO:0010200: response to chitin	1.88E-03
59	GO:0006612: protein targeting to membrane	1.88E-03
60	GO:0010103: stomatal complex morphogenesis	1.88E-03
61	GO:0010363: regulation of plant-type hypersensitive response	2.09E-03
62	GO:0009117: nucleotide metabolic process	2.15E-03
63	GO:0045037: protein import into chloroplast stroma	2.15E-03
64	GO:0050821: protein stabilization	2.15E-03
65	GO:0016485: protein processing	2.15E-03
66	GO:0071704: organic substance metabolic process	2.15E-03
67	GO:0046034: ATP metabolic process	2.15E-03
68	GO:0019216: regulation of lipid metabolic process	2.15E-03
69	GO:0009867: jasmonic acid mediated signaling pathway	2.31E-03
70	GO:0009817: defense response to fungus, incompatible interaction	2.31E-03
71	GO:0031348: negative regulation of defense response	2.31E-03
72	GO:0034755: iron ion transmembrane transport	2.89E-03
73	GO:0019748: secondary metabolic process	2.89E-03
74	GO:0006526: arginine biosynthetic process	2.89E-03
75	GO:0006796: phosphate-containing compound metabolic process	2.89E-03
76	GO:0009902: chloroplast relocation	3.39E-03
77	GO:0000165: MAPK cascade	3.39E-03
78	GO:0006561: proline biosynthetic process	3.76E-03
79	GO:0006662: glycerol ether metabolic process	4.37E-03
80	GO:0009106: lipoate metabolic process	4.68E-03
81	GO:0010205: photoinhibition	4.68E-03
82	GO:0006766: vitamin metabolic process	4.68E-03
83	GO:0009108: coenzyme biosynthetic process	4.68E-03
84	GO:0010206: photosystem II repair	4.68E-03
85	GO:0006811: ion transport	5.07E-03
86	GO:0046939: nucleotide phosphorylation	5.66E-03
87	GO:0000272: polysaccharide catabolic process	5.66E-03
88	GO:0005985: sucrose metabolic process	5.66E-03
89	GO:0009072: aromatic amino acid family metabolic process	6.73E-03
90	GO:0045454: cell redox homeostasis	7.37E-03
91	GO:0009832: plant-type cell wall biogenesis	7.85E-03
92	GO:0005983: starch catabolic process	7.85E-03
93	GO:0009744: response to sucrose	8.07E-03
94	GO:0016556: mRNA modification	9.04E-03
95	GO:0006006: glucose metabolic process	9.04E-03
96	GO:0006354: DNA-templated transcription, elongation	9.04E-03
97	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.03E-02
98	GO:0006546: glycine catabolic process	1.03E-02
99	GO:0042631: cellular response to water deprivation	1.16E-02
100	GO:0031408: oxylipin biosynthetic process	1.29E-02
101	GO:0016049: cell growth	1.58E-02
102	GO:0006833: water transport	1.58E-02
103	GO:0009750: response to fructose	1.58E-02
104	GO:0050832: defense response to fungus	1.64E-02
105	GO:0016126: sterol biosynthetic process	1.73E-02
106	GO:0019684: photosynthesis, light reaction	1.73E-02
107	GO:0009749: response to glucose	1.73E-02
108	GO:0009966: regulation of signal transduction	1.89E-02
109	GO:0010193: response to ozone	2.06E-02
110	GO:0006139: nucleobase-containing compound metabolic process	2.22E-02
111	GO:0009695: jasmonic acid biosynthetic process	2.40E-02
112	GO:0015991: ATP hydrolysis coupled proton transport	2.57E-02
113	GO:0080167: response to karrikin	2.70E-02
114	GO:0009735: response to cytokinin	3.52E-02
115	GO:0006096: glycolytic process	3.83E-02
116	GO:0006979: response to oxidative stress	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
2	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
3	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
4	GO:0019200: carbohydrate kinase activity	0.00E+00
5	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
6	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
7	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
8	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
9	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
10	GO:0010242: oxygen evolving activity	0.00E+00
11	GO:0003991: acetylglutamate kinase activity	0.00E+00
12	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
13	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
14	GO:0004614: phosphoglucomutase activity	0.00E+00
15	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	4.19E-07
16	GO:0016168: chlorophyll binding	3.39E-06
17	GO:0004750: ribulose-phosphate 3-epimerase activity	3.74E-04
18	GO:0008974: phosphoribulokinase activity	3.74E-04
19	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	3.74E-04
20	GO:0004618: phosphoglycerate kinase activity	3.74E-04
21	GO:0015088: copper uptake transmembrane transporter activity	3.74E-04
22	GO:0015140: malate transmembrane transporter activity	3.74E-04
23	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.44E-04
24	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.76E-04
25	GO:0004042: acetyl-CoA:L-glutamate N-acetyltransferase activity	8.76E-04
26	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	8.76E-04
27	GO:0004349: glutamate 5-kinase activity	8.76E-04
28	GO:0051920: peroxiredoxin activity	8.76E-04
29	GO:0016209: antioxidant activity	2.15E-03
30	GO:0004659: prenyltransferase activity	2.15E-03
31	GO:0004332: fructose-bisphosphate aldolase activity	2.15E-03
32	GO:0015035: protein disulfide oxidoreductase activity	2.28E-03
33	GO:0016868: intramolecular transferase activity, phosphotransferases	2.89E-03
34	GO:0005381: iron ion transmembrane transporter activity	2.89E-03
35	GO:0004017: adenylate kinase activity	2.89E-03
36	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	2.89E-03
37	GO:0019201: nucleotide kinase activity	4.68E-03
38	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.68E-03
39	GO:0019205: nucleobase-containing compound kinase activity	4.68E-03
40	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	5.66E-03
41	GO:0008047: enzyme activator activity	5.66E-03
42	GO:0016776: phosphotransferase activity, phosphate group as acceptor	6.73E-03
43	GO:0004427: inorganic diphosphatase activity	6.73E-03
44	GO:0042578: phosphoric ester hydrolase activity	6.73E-03
45	GO:0008266: poly(U) RNA binding	6.73E-03
46	GO:0005215: transporter activity	7.59E-03
47	GO:0003993: acid phosphatase activity	1.16E-02
48	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.44E-02
49	GO:0008080: N-acetyltransferase activity	1.73E-02
50	GO:0005509: calcium ion binding	1.75E-02
51	GO:0015297: antiporter activity	2.22E-02
52	GO:0051537: 2 iron, 2 sulfur cluster binding	2.40E-02
53	GO:0015078: hydrogen ion transmembrane transporter activity	2.57E-02
54	GO:0051539: 4 iron, 4 sulfur cluster binding	3.33E-02
55	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.73E-02
56	GO:0000287: magnesium ion binding	4.41E-02
57	GO:0005198: structural molecule activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0009279: cell outer membrane	0.00E+00
2	GO:0009783: photosystem II antenna complex	0.00E+00
3	GO:0030093: chloroplast photosystem I	0.00E+00
4	GO:0009579: thylakoid	6.90E-28
5	GO:0009507: chloroplast	6.04E-27
6	GO:0009941: chloroplast envelope	9.45E-24
7	GO:0009535: chloroplast thylakoid membrane	1.29E-22
8	GO:0010287: plastoglobule	6.41E-19
9	GO:0009522: photosystem I	2.23E-17
10	GO:0009538: photosystem I reaction center	3.93E-10
11	GO:0009523: photosystem II	4.46E-10
12	GO:0010319: stromule	1.45E-09
13	GO:0031977: thylakoid lumen	1.89E-09
14	GO:0019898: extrinsic component of membrane	7.79E-09
15	GO:0009654: photosystem II oxygen evolving complex	2.03E-08
16	GO:0009570: chloroplast stroma	1.08E-07
17	GO:0009534: chloroplast thylakoid	3.52E-07
18	GO:0009543: chloroplast thylakoid lumen	9.42E-07
19	GO:0009533: chloroplast stromal thylakoid	5.20E-06
20	GO:0048046: apoplast	6.35E-05
21	GO:0016020: membrane	9.17E-05
22	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	1.88E-04
23	GO:0009706: chloroplast inner membrane	2.41E-04
24	GO:0009517: PSII associated light-harvesting complex II	3.74E-04
25	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	3.74E-04
26	GO:0042651: thylakoid membrane	9.57E-04
27	GO:0009508: plastid chromosome	2.89E-03
28	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.76E-03
29	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.66E-03
30	GO:0009295: nucleoid	1.03E-02