Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G073199

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042273: ribosomal large subunit biogenesis0.00E+00
2GO:0045694: regulation of embryo sac egg cell differentiation0.00E+00
3GO:0010288: response to lead ion0.00E+00
4GO:0019915: lipid storage2.33E-07
5GO:0010162: seed dormancy process5.75E-07
6GO:0050826: response to freezing7.44E-07
7GO:0010182: sugar mediated signaling pathway1.81E-06
8GO:0009845: seed germination3.12E-06
9GO:0009933: meristem structural organization4.30E-06
10GO:0016567: protein ubiquitination7.95E-06
11GO:0009640: photomorphogenesis1.53E-05
12GO:0009793: embryo development ending in seed dormancy4.03E-05
13GO:0016571: histone methylation4.14E-05
14GO:0051028: mRNA transport4.98E-05
15GO:0045292: mRNA cis splicing, via spliceosome4.98E-05
16GO:0006378: mRNA polyadenylation4.98E-05
17GO:0048574: long-day photoperiodism, flowering4.98E-05
18GO:0007112: male meiosis cytokinesis4.98E-05
19GO:0009909: regulation of flower development7.75E-05
20GO:0045727: positive regulation of translation2.30E-04
21GO:0016579: protein deubiquitination2.90E-04
22GO:0042256: mature ribosome assembly3.47E-04
23GO:0008654: phospholipid biosynthetic process3.47E-04
24GO:0006401: RNA catabolic process3.47E-04
25GO:0031053: primary miRNA processing3.47E-04
26GO:0000398: mRNA splicing, via spliceosome5.88E-04
27GO:0010228: vegetative to reproductive phase transition of meristem6.98E-04
28GO:0030422: production of siRNA involved in RNA interference7.69E-04
29GO:0006366: transcription from RNA polymerase II promoter7.69E-04
30GO:0007155: cell adhesion7.69E-04
31GO:0000741: karyogamy9.34E-04
32GO:0010311: lateral root formation9.34E-04
33GO:0010093: specification of floral organ identity9.34E-04
34GO:0010074: maintenance of meristem identity9.34E-04
35GO:0045893: positive regulation of transcription, DNA-templated1.10E-03
36GO:0006342: chromatin silencing1.11E-03
37GO:0006413: translational initiation1.46E-03
38GO:0045010: actin nucleation1.48E-03
39GO:0006312: mitotic recombination1.48E-03
40GO:0016070: RNA metabolic process1.48E-03
41GO:0010389: regulation of G2/M transition of mitotic cell cycle1.88E-03
42GO:0043687: post-translational protein modification2.08E-03
43GO:0006406: mRNA export from nucleus2.08E-03
44GO:0006446: regulation of translational initiation2.28E-03
45GO:0001731: formation of translation preinitiation complex2.50E-03
46GO:0006261: DNA-dependent DNA replication2.50E-03
47GO:0035196: production of miRNAs involved in gene silencing by miRNA2.97E-03
48GO:0010090: trichome morphogenesis3.49E-03
49GO:0000278: mitotic cell cycle3.75E-03
50GO:0006888: ER to Golgi vesicle-mediated transport3.75E-03
51GO:0042254: ribosome biogenesis4.31E-03
52GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation4.59E-03
53GO:0000165: MAPK cascade4.87E-03
54GO:0006275: regulation of DNA replication4.87E-03
55GO:0000226: microtubule cytoskeleton organization5.16E-03
56GO:0009560: embryo sac egg cell differentiation5.16E-03
57GO:0009086: methionine biosynthetic process6.09E-03
58GO:0000911: cytokinesis by cell plate formation7.40E-03
59GO:0051567: histone H3-K9 methylation7.76E-03
60GO:0006306: DNA methylation8.45E-03
61GO:0006260: DNA replication1.67E-02
62GO:0006511: ubiquitin-dependent protein catabolic process2.74E-02
63GO:0006950: response to stress3.68E-02
64GO:0006629: lipid metabolic process3.93E-02
RankGO TermAdjusted P value
1GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity0.00E+00
2GO:0032791: lead ion binding0.00E+00
3GO:0043022: ribosome binding1.08E-05
4GO:0004708: MAP kinase kinase activity4.98E-05
5GO:0000339: RNA cap binding4.98E-05
6GO:0070300: phosphatidic acid binding4.98E-05
7GO:0043023: ribosomal large subunit binding4.98E-05
8GO:0031625: ubiquitin protein ligase binding4.98E-05
9GO:0016780: phosphotransferase activity, for other substituted phosphate groups2.30E-04
10GO:0000062: fatty-acyl-CoA binding2.30E-04
11GO:0003724: RNA helicase activity3.47E-04
12GO:0003729: mRNA binding6.17E-04
13GO:0016817: hydrolase activity, acting on acid anhydrides6.17E-04
14GO:0008026: ATP-dependent helicase activity6.24E-04
15GO:0004386: helicase activity1.46E-03
16GO:0003743: translation initiation factor activity1.82E-03
17GO:0016651: oxidoreductase activity, acting on NAD(P)H2.50E-03
18GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides2.97E-03
19GO:0008137: NADH dehydrogenase (ubiquinone) activity3.49E-03
20GO:0051539: 4 iron, 4 sulfur cluster binding5.16E-03
21GO:0010181: FMN binding5.77E-03
22GO:0003723: RNA binding5.99E-03
23GO:0005488: binding1.24E-02
24GO:0051287: NAD binding1.44E-02
25GO:0004842: ubiquitin-protein transferase activity1.90E-02
26GO:0017111: nucleoside-triphosphatase activity3.74E-02
27GO:0003676: nucleic acid binding4.58E-02
RankGO TermAdjusted P value
1GO:0005849: mRNA cleavage factor complex4.98E-05
2GO:0005846: nuclear cap binding complex4.98E-05
3GO:0031461: cullin-RING ubiquitin ligase complex4.98E-05
4GO:0005801: cis-Golgi network6.17E-04
5GO:0005681: spliceosomal complex1.68E-03
6GO:0016282: eukaryotic 43S preinitiation complex2.50E-03
7GO:0033290: eukaryotic 48S preinitiation complex2.50E-03
8GO:0005852: eukaryotic translation initiation factor 3 complex2.73E-03
9GO:0005654: nucleoplasm2.97E-03
10GO:0009524: phragmoplast5.77E-03
11GO:0045271: respiratory chain complex I9.19E-03
12GO:0005747: mitochondrial respiratory chain complex I9.56E-03
13GO:0005829: cytosol2.04E-02
14GO:0009505: plant-type cell wall4.85E-02