co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G068862

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900865: chloroplast RNA modification	0.00E+00
2	GO:0010270: photosystem II oxygen evolving complex assembly	0.00E+00
3	GO:0043953: protein transport by the Tat complex	0.00E+00
4	GO:0046506: sulfolipid biosynthetic process	0.00E+00
5	GO:0009306: protein secretion	4.76E-09
6	GO:0006364: rRNA processing	1.27E-06
7	GO:0010027: thylakoid membrane organization	1.58E-06
8	GO:0045036: protein targeting to chloroplast	2.30E-05
9	GO:0009658: chloroplast organization	4.93E-05
10	GO:0006457: protein folding	1.95E-04
11	GO:0006399: tRNA metabolic process	2.06E-04
12	GO:0006591: ornithine metabolic process	3.20E-04
13	GO:0019252: starch biosynthetic process	3.41E-04
14	GO:0009407: toxin catabolic process	3.52E-04
15	GO:0000023: maltose metabolic process	5.96E-04
16	GO:1901671: positive regulation of superoxide dismutase activity	7.52E-04
17	GO:0006655: phosphatidylglycerol biosynthetic process	7.64E-04
18	GO:0051607: defense response to virus	7.64E-04
19	GO:0008299: isoprenoid biosynthetic process	8.94E-04
20	GO:0043085: positive regulation of catalytic activity	1.20E-03
21	GO:0019760: glucosinolate metabolic process	1.28E-03
22	GO:0010038: response to metal ion	1.28E-03
23	GO:0051085: chaperone mediated protein folding requiring cofactor	1.28E-03
24	GO:0010731: protein glutathionylation	1.28E-03
25	GO:0016075: rRNA catabolic process	1.28E-03
26	GO:0043067: regulation of programmed cell death	1.28E-03
27	GO:0009231: riboflavin biosynthetic process	1.28E-03
28	GO:0009247: glycolipid biosynthetic process	1.28E-03
29	GO:0010267: production of ta-siRNAs involved in RNA interference	1.34E-03
30	GO:0035196: production of miRNAs involved in gene silencing by miRNA	1.34E-03
31	GO:0010103: stomatal complex morphogenesis	1.51E-03
32	GO:0045038: protein import into chloroplast thylakoid membrane	1.87E-03
33	GO:0000373: Group II intron splicing	1.87E-03
34	GO:0042026: protein refolding	1.87E-03
35	GO:0071704: organic substance metabolic process	1.87E-03
36	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.87E-03
37	GO:0019375: galactolipid biosynthetic process	1.87E-03
38	GO:0009902: chloroplast relocation	2.72E-03
39	GO:0048229: gametophyte development	3.22E-03
40	GO:0006749: glutathione metabolic process	3.22E-03
41	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.35E-03
42	GO:0009073: aromatic amino acid family biosynthetic process	3.50E-03
43	GO:0009814: defense response, incompatible interaction	4.02E-03
44	GO:0010583: response to cyclopentenone	4.02E-03
45	GO:0034660: ncRNA metabolic process	4.02E-03
46	GO:0016226: iron-sulfur cluster assembly	4.70E-03
47	GO:0051604: protein maturation	4.87E-03
48	GO:0015031: protein transport	7.61E-03
49	GO:0015995: chlorophyll biosynthetic process	7.69E-03
50	GO:0008380: RNA splicing	7.76E-03
51	GO:0016556: mRNA modification	7.76E-03
52	GO:0042793: transcription from plastid promoter	1.11E-02
53	GO:0009409: response to cold	1.23E-02
54	GO:0015996: chlorophyll catabolic process	1.23E-02
55	GO:0045893: positive regulation of transcription, DNA-templated	1.26E-02
56	GO:0006396: RNA processing	1.32E-02
57	GO:0019684: photosynthesis, light reaction	1.49E-02
58	GO:0016036: cellular response to phosphate starvation	1.62E-02
59	GO:0008219: cell death	1.62E-02
60	GO:0044267: cellular protein metabolic process	1.62E-02
61	GO:0009627: systemic acquired resistance	1.76E-02
62	GO:0035304: regulation of protein dephosphorylation	1.90E-02
63	GO:0010363: regulation of plant-type hypersensitive response	1.90E-02
64	GO:0006098: pentose-phosphate shunt	2.03E-02
65	GO:0006869: lipid transport	2.05E-02
66	GO:0006184: obsolete GTP catabolic process	2.65E-02
67	GO:0006520: cellular amino acid metabolic process	2.68E-02
68	GO:0006626: protein targeting to mitochondrion	2.68E-02
69	GO:0009560: embryo sac egg cell differentiation	2.85E-02
70	GO:0045454: cell redox homeostasis	2.99E-02
71	GO:0048573: photoperiodism, flowering	3.02E-02
72	GO:0009735: response to cytokinin	3.02E-02
73	GO:0009220: pyrimidine ribonucleotide biosynthetic process	3.19E-02
74	GO:0006662: glycerol ether metabolic process	3.19E-02
75	GO:0016117: carotenoid biosynthetic process	3.37E-02
76	GO:0009637: response to blue light	3.37E-02
77	GO:0009790: embryo development	3.55E-02
78	GO:0019761: glucosinolate biosynthetic process	3.55E-02
79	GO:0010114: response to red light	3.73E-02
80	GO:0010218: response to far red light	4.12E-02
81	GO:0048481: plant ovule development	4.31E-02
82	GO:0009723: response to ethylene	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0009977: proton motive force dependent protein transmembrane transporter activity	0.00E+00
2	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
3	GO:0003919: FMN adenylyltransferase activity	0.00E+00
4	GO:0051743: red chlorophyll catabolite reductase activity	0.00E+00
5	GO:0008565: protein transporter activity	4.53E-06
6	GO:0004525: ribonuclease III activity	1.47E-04
7	GO:0004362: glutathione-disulfide reductase activity	3.20E-04
8	GO:0004585: ornithine carbamoyltransferase activity	3.20E-04
9	GO:0008146: sulfotransferase activity	3.20E-04
10	GO:0045174: glutathione dehydrogenase (ascorbate) activity	3.20E-04
11	GO:0051082: unfolded protein binding	6.61E-04
12	GO:0016630: protochlorophyllide reductase activity	7.52E-04
13	GO:0003959: NADPH dehydrogenase activity	1.28E-03
14	GO:0016743: carboxyl- or carbamoyltransferase activity	1.28E-03
15	GO:0070569: uridylyltransferase activity	1.87E-03
16	GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	1.87E-03
17	GO:0016868: intramolecular transferase activity, phosphotransferases	2.50E-03
18	GO:0016817: hydrolase activity, acting on acid anhydrides	3.22E-03
19	GO:0008047: enzyme activator activity	4.87E-03
20	GO:0043022: ribosome binding	4.87E-03
21	GO:0000287: magnesium ion binding	6.92E-03
22	GO:0046914: transition metal ion binding	7.76E-03
23	GO:0005216: ion channel activity	1.36E-02
24	GO:0005525: GTP binding	1.48E-02
25	GO:0016597: amino acid binding	2.52E-02
26	GO:0008236: serine-type peptidase activity	3.37E-02
27	GO:0005507: copper ion binding	3.44E-02
28	GO:0003723: RNA binding	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0055035: plastid thylakoid membrane	0.00E+00
2	GO:0009507: chloroplast	1.34E-13
3	GO:0009941: chloroplast envelope	1.75E-07
4	GO:0009570: chloroplast stroma	2.26E-07
5	GO:0009535: chloroplast thylakoid membrane	5.11E-07
6	GO:0009579: thylakoid	2.22E-04
7	GO:0009526: plastid envelope	3.20E-04
8	GO:0044445: cytosolic part	3.20E-04
9	GO:0009706: chloroplast inner membrane	2.27E-03
10	GO:0019898: extrinsic component of membrane	3.22E-03
11	GO:0009654: photosystem II oxygen evolving complex	4.02E-03
12	GO:0010319: stromule	4.39E-03
13	GO:0031977: thylakoid lumen	4.70E-03
14	GO:0009532: plastid stroma	4.87E-03
15	GO:0009543: chloroplast thylakoid lumen	1.11E-02
16	GO:0048046: apoplast	1.51E-02
17	GO:0005739: mitochondrion	2.29E-02
18	GO:0005759: mitochondrial matrix	2.68E-02
19	GO:0009523: photosystem II	3.02E-02
20	GO:0009536: plastid	3.05E-02