co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G064612

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
3	GO:0032465: regulation of cytokinesis	0.00E+00
4	GO:0019915: lipid storage	6.94E-07
5	GO:0010162: seed dormancy process	1.71E-06
6	GO:0050826: response to freezing	2.21E-06
7	GO:0010182: sugar mediated signaling pathway	5.25E-06
8	GO:0009845: seed germination	8.96E-06
9	GO:0009933: meristem structural organization	1.23E-05
10	GO:0010074: maintenance of meristem identity	2.32E-05
11	GO:0009640: photomorphogenesis	4.22E-05
12	GO:0007059: chromosome segregation	8.01E-05
13	GO:0051028: mRNA transport	8.01E-05
14	GO:0045292: mRNA cis splicing, via spliceosome	8.01E-05
15	GO:0006378: mRNA polyadenylation	8.01E-05
16	GO:0048574: long-day photoperiodism, flowering	8.01E-05
17	GO:0016571: histone methylation	8.50E-05
18	GO:0006406: mRNA export from nucleus	1.03E-04
19	GO:0009909: regulation of flower development	1.97E-04
20	GO:0043987: histone H3-S10 phosphorylation	2.03E-04
21	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	3.86E-04
22	GO:0016567: protein ubiquitination	4.57E-04
23	GO:0000226: microtubule cytoskeleton organization	4.65E-04
24	GO:0031053: primary miRNA processing	5.29E-04
25	GO:0016579: protein deubiquitination	5.51E-04
26	GO:0009086: methionine biosynthetic process	5.96E-04
27	GO:0070084: protein initiator methionine removal	7.23E-04
28	GO:0006366: transcription from RNA polymerase II promoter	1.17E-03
29	GO:0009987: cellular process	1.17E-03
30	GO:0010228: vegetative to reproductive phase transition of meristem	1.30E-03
31	GO:0009793: embryo development ending in seed dormancy	1.32E-03
32	GO:0000741: karyogamy	1.41E-03
33	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.67E-03
34	GO:0016572: histone phosphorylation	1.67E-03
35	GO:0006342: chromatin silencing	1.67E-03
36	GO:0045893: positive regulation of transcription, DNA-templated	2.00E-03
37	GO:0010048: vernalization response	2.20E-03
38	GO:0006284: base-excision repair	2.20E-03
39	GO:0006354: DNA-templated transcription, elongation	2.20E-03
40	GO:0006312: mitotic recombination	2.20E-03
41	GO:0016070: RNA metabolic process	2.20E-03
42	GO:0006974: cellular response to DNA damage stimulus	2.48E-03
43	GO:0006260: DNA replication	2.54E-03
44	GO:0006446: regulation of translational initiation	3.44E-03
45	GO:0001731: formation of translation preinitiation complex	3.79E-03
46	GO:0006914: autophagy	4.15E-03
47	GO:0009966: regulation of signal transduction	4.53E-03
48	GO:0000278: mitotic cell cycle	5.67E-03
49	GO:0031047: gene silencing by RNA	6.94E-03
50	GO:0006950: response to stress	7.82E-03
51	GO:0009560: embryo sac egg cell differentiation	7.83E-03
52	GO:0007049: cell cycle	8.29E-03
53	GO:0000911: cytokinesis by cell plate formation	1.13E-02
54	GO:0051567: histone H3-K9 methylation	1.18E-02
55	GO:0016311: dephosphorylation	1.29E-02
56	GO:0006306: DNA methylation	1.29E-02
57	GO:0000398: mRNA splicing, via spliceosome	1.40E-02
58	GO:0007275: multicellular organism development	1.81E-02
59	GO:0006413: translational initiation	2.62E-02
60	GO:0006470: protein dephosphorylation	3.14E-02
61	GO:0006281: DNA repair	3.77E-02
62	GO:0006096: glycolytic process	4.02E-02

Rank	GO Term	Adjusted P value
1	GO:0008409: 5'-3' exonuclease activity	0.00E+00
2	GO:0008420: CTD phosphatase activity	0.00E+00
3	GO:0000339: RNA cap binding	8.01E-05
4	GO:0017108: 5'-flap endonuclease activity	8.01E-05
5	GO:0035175: histone kinase activity (H3-S10 specific)	2.03E-04
6	GO:0003723: RNA binding	4.74E-04
7	GO:0070006: metalloaminopeptidase activity	7.23E-04
8	GO:0008235: metalloexopeptidase activity	9.36E-04
9	GO:0003729: mRNA binding	9.36E-04
10	GO:0043022: ribosome binding	1.41E-03
11	GO:0004177: aminopeptidase activity	1.93E-03
12	GO:0004518: nuclease activity	2.20E-03
13	GO:0030955: potassium ion binding	2.20E-03
14	GO:0004743: pyruvate kinase activity	2.20E-03
15	GO:0004519: endonuclease activity	2.78E-03
16	GO:0004527: exonuclease activity	3.44E-03
17	GO:0008375: acetylglucosaminyltransferase activity	3.44E-03
18	GO:0005488: binding	3.86E-03
19	GO:0000287: magnesium ion binding	5.59E-03
20	GO:0003676: nucleic acid binding	8.77E-03
21	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	8.77E-03
22	GO:0016791: phosphatase activity	1.23E-02
23	GO:0008026: ATP-dependent helicase activity	1.45E-02
24	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.57E-02
25	GO:0050897: cobalt ion binding	1.81E-02
26	GO:0004386: helicase activity	2.62E-02
27	GO:0016788: hydrolase activity, acting on ester bonds	2.62E-02
28	GO:0003743: translation initiation factor activity	3.06E-02
29	GO:0016787: hydrolase activity	4.20E-02

Rank	GO Term	Adjusted P value
1	GO:0000775: chromosome, centromeric region	1.33E-06
2	GO:0005849: mRNA cleavage factor complex	8.01E-05
3	GO:0005846: nuclear cap binding complex	8.01E-05
4	GO:0000418: DNA-directed RNA polymerase IV complex	1.17E-03
5	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.41E-03
6	GO:0005665: DNA-directed RNA polymerase II, core complex	1.41E-03
7	GO:0005681: spliceosomal complex	2.48E-03
8	GO:0016282: eukaryotic 43S preinitiation complex	3.79E-03
9	GO:0033290: eukaryotic 48S preinitiation complex	3.79E-03
10	GO:0005852: eukaryotic translation initiation factor 3 complex	4.15E-03
11	GO:0005654: nucleoplasm	4.53E-03
12	GO:0005819: spindle	5.67E-03
13	GO:0005635: nuclear envelope	6.51E-03
14	GO:0015934: large ribosomal subunit	1.02E-02
15	GO:0005743: mitochondrial inner membrane	1.69E-02
16	GO:0005634: nucleus	3.53E-02
17	GO:0005694: chromosome	4.28E-02