co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G061830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010288: response to lead ion	0.00E+00
2	GO:0080029: cellular response to boron-containing substance levels	0.00E+00
3	GO:0009150: purine ribonucleotide metabolic process	0.00E+00
4	GO:0042273: ribosomal large subunit biogenesis	0.00E+00
5	GO:0010036: response to boron-containing substance	0.00E+00
6	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
7	GO:0006144: purine nucleobase metabolic process	0.00E+00
8	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
9	GO:0019628: urate catabolic process	0.00E+00
10	GO:0071918: urea transmembrane transport	4.39E-04
11	GO:0009743: response to carbohydrate	4.39E-04
12	GO:0015793: glycerol transport	4.39E-04
13	GO:0007112: male meiosis cytokinesis	4.39E-04
14	GO:0016559: peroxisome fission	4.39E-04
15	GO:0009168: purine ribonucleoside monophosphate biosynthetic process	4.39E-04
16	GO:2000280: regulation of root development	4.39E-04
17	GO:0032264: IMP salvage	4.39E-04
18	GO:0019427: acetyl-CoA biosynthetic process from acetate	4.39E-04
19	GO:0006826: iron ion transport	5.62E-04
20	GO:0009116: nucleoside metabolic process	6.98E-04
21	GO:0034389: lipid particle organization	1.03E-03
22	GO:0046713: borate transport	1.03E-03
23	GO:0015700: arsenite transport	1.03E-03
24	GO:0010109: regulation of photosynthesis	1.03E-03
25	GO:0035445: borate transmembrane transport	1.03E-03
26	GO:0006527: arginine catabolic process	1.03E-03
27	GO:0006083: acetate metabolic process	1.03E-03
28	GO:0010106: cellular response to iron ion starvation	1.03E-03
29	GO:0006491: N-glycan processing	1.73E-03
30	GO:0000303: response to superoxide	1.73E-03
31	GO:0045727: positive regulation of translation	1.73E-03
32	GO:0006168: adenine salvage	1.73E-03
33	GO:0006188: IMP biosynthetic process	1.73E-03
34	GO:0006471: protein ADP-ribosylation	1.73E-03
35	GO:0048831: regulation of shoot system development	1.73E-03
36	GO:0010152: pollen maturation	1.73E-03
37	GO:0046836: glycolipid transport	1.73E-03
38	GO:0006790: sulfur compound metabolic process	2.49E-03
39	GO:0042256: mature ribosome assembly	2.49E-03
40	GO:0016485: protein processing	2.49E-03
41	GO:0006081: cellular aldehyde metabolic process	3.39E-03
42	GO:0070084: protein initiator methionine removal	3.39E-03
43	GO:0009873: ethylene-activated signaling pathway	3.39E-03
44	GO:0000165: MAPK cascade	4.27E-03
45	GO:0019432: triglyceride biosynthetic process	4.40E-03
46	GO:0046685: response to arsenic-containing substance	5.46E-03
47	GO:0016132: brassinosteroid biosynthetic process	5.46E-03
48	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.46E-03
49	GO:0016579: protein deubiquitination	5.46E-03
50	GO:0009987: cellular process	5.46E-03
51	GO:0006084: acetyl-CoA metabolic process	5.46E-03
52	GO:0010167: response to nitrate	5.46E-03
53	GO:0030422: production of siRNA involved in RNA interference	5.46E-03
54	GO:0015706: nitrate transport	5.46E-03
55	GO:0010025: wax biosynthetic process	5.46E-03
56	GO:0006367: transcription initiation from RNA polymerase II promoter	5.46E-03
57	GO:0005985: sucrose metabolic process	6.63E-03
58	GO:0007031: peroxisome organization	6.63E-03
59	GO:0000741: karyogamy	6.63E-03
60	GO:0006891: intra-Golgi vesicle-mediated transport	6.63E-03
61	GO:0010311: lateral root formation	6.63E-03
62	GO:0010074: maintenance of meristem identity	6.63E-03
63	GO:0010310: regulation of hydrogen peroxide metabolic process	6.63E-03
64	GO:0009615: response to virus	6.63E-03
65	GO:0010029: regulation of seed germination	7.88E-03
66	GO:0040007: growth	7.88E-03
67	GO:0006002: fructose 6-phosphate metabolic process	7.88E-03
68	GO:0010118: stomatal movement	9.20E-03
69	GO:0006312: mitotic recombination	1.06E-02
70	GO:0006635: fatty acid beta-oxidation	1.07E-02
71	GO:0000398: mRNA splicing, via spliceosome	1.07E-02
72	GO:0019915: lipid storage	1.20E-02
73	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.20E-02
74	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.36E-02
75	GO:0007033: vacuole organization	1.36E-02
76	GO:0016571: histone methylation	1.36E-02
77	GO:0006406: mRNA export from nucleus	1.52E-02
78	GO:0015996: chlorophyll catabolic process	1.68E-02
79	GO:0006636: unsaturated fatty acid biosynthetic process	1.68E-02
80	GO:0010162: seed dormancy process	1.68E-02
81	GO:0006446: regulation of translational initiation	1.68E-02
82	GO:0050826: response to freezing	1.86E-02
83	GO:0001731: formation of translation preinitiation complex	1.86E-02
84	GO:0006833: water transport	1.86E-02
85	GO:0009749: response to glucose	2.04E-02
86	GO:0016126: sterol biosynthetic process	2.04E-02
87	GO:0006631: fatty acid metabolic process	2.04E-02
88	GO:0009739: response to gibberellin	2.22E-02
89	GO:0009966: regulation of signal transduction	2.22E-02
90	GO:0009269: response to desiccation	2.22E-02
91	GO:0006612: protein targeting to membrane	2.41E-02
92	GO:0009793: embryo development ending in seed dormancy	2.48E-02
93	GO:0055114: oxidation-reduction process	2.48E-02
94	GO:0010363: regulation of plant-type hypersensitive response	2.61E-02
95	GO:0035304: regulation of protein dephosphorylation	2.61E-02
96	GO:0010182: sugar mediated signaling pathway	2.61E-02
97	GO:0006413: translational initiation	2.63E-02
98	GO:0009867: jasmonic acid mediated signaling pathway	2.81E-02
99	GO:0009553: embryo sac development	2.81E-02
100	GO:0031348: negative regulation of defense response	2.81E-02
101	GO:0009751: response to salicylic acid	3.02E-02
102	GO:0042254: ribosome biogenesis	3.23E-02
103	GO:0009845: seed germination	3.23E-02
104	GO:0035556: intracellular signal transduction	3.23E-02
105	GO:0006470: protein dephosphorylation	3.39E-02
106	GO:0010119: regulation of stomatal movement	3.45E-02
107	GO:0009933: meristem structural organization	3.68E-02
108	GO:0006275: regulation of DNA replication	3.68E-02
109	GO:0000413: protein peptidyl-prolyl isomerization	3.68E-02
110	GO:0006457: protein folding	3.86E-02
111	GO:0009560: embryo sac egg cell differentiation	3.91E-02
112	GO:0016567: protein ubiquitination	4.38E-02
113	GO:0009737: response to abscisic acid	4.59E-02
114	GO:0048366: leaf development	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0032791: lead ion binding	0.00E+00
2	GO:0004846: urate oxidase activity	0.00E+00
3	GO:0004053: arginase activity	0.00E+00
4	GO:0009918: sterol delta7 reductase activity	0.00E+00
5	GO:0080138: borate uptake transmembrane transporter activity	0.00E+00
6	GO:0043022: ribosome binding	3.35E-04
7	GO:0016208: AMP binding	4.39E-04
8	GO:0016813: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	4.39E-04
9	GO:0000248: C-5 sterol desaturase activity	4.39E-04
10	GO:0004435: phosphatidylinositol phospholipase C activity	4.39E-04
11	GO:0015168: glycerol transmembrane transporter activity	4.39E-04
12	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.39E-04
13	GO:0003876: AMP deaminase activity	4.39E-04
14	GO:0015105: arsenite transmembrane transporter activity	4.39E-04
15	GO:0004708: MAP kinase kinase activity	4.39E-04
16	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	4.39E-04
17	GO:0070300: phosphatidic acid binding	4.39E-04
18	GO:0015204: urea transmembrane transporter activity	4.39E-04
19	GO:0047627: adenylylsulfatase activity	4.39E-04
20	GO:0043023: ribosomal large subunit binding	4.39E-04
21	GO:0004559: alpha-mannosidase activity	1.03E-03
22	GO:0015250: water channel activity	1.03E-03
23	GO:0019239: deaminase activity	1.03E-03
24	GO:0046715: borate transmembrane transporter activity	1.03E-03
25	GO:0008430: selenium binding	1.03E-03
26	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.73E-03
27	GO:0004602: glutathione peroxidase activity	1.73E-03
28	GO:0000062: fatty-acyl-CoA binding	1.73E-03
29	GO:0051861: glycolipid binding	1.73E-03
30	GO:0003987: acetate-CoA ligase activity	1.73E-03
31	GO:0017089: glycolipid transporter activity	1.73E-03
32	GO:0003999: adenine phosphoribosyltransferase activity	1.73E-03
33	GO:0003997: acyl-CoA oxidase activity	3.39E-03
34	GO:0070006: metalloaminopeptidase activity	3.39E-03
35	GO:0008235: metalloexopeptidase activity	4.40E-03
36	GO:0051539: 4 iron, 4 sulfur cluster binding	4.65E-03
37	GO:0003995: acyl-CoA dehydrogenase activity	5.46E-03
38	GO:0003743: translation initiation factor activity	6.23E-03
39	GO:0003872: 6-phosphofructokinase activity	9.20E-03
40	GO:0004177: aminopeptidase activity	9.20E-03
41	GO:0031418: L-ascorbic acid binding	1.06E-02
42	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.20E-02
43	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.27E-02
44	GO:0042803: protein homodimerization activity	1.41E-02
45	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.86E-02
46	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.86E-02
47	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.04E-02
48	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.61E-02
49	GO:0031072: heat shock protein binding	2.81E-02
50	GO:0008483: transaminase activity	3.91E-02
51	GO:0005215: transporter activity	4.03E-02
52	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.14E-02
53	GO:0010181: FMN binding	4.38E-02
54	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.38E-02
55	GO:0008236: serine-type peptidase activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005673: transcription factor TFIIE complex	0.00E+00
2	GO:0000418: DNA-directed RNA polymerase IV complex	2.42E-04
3	GO:0005665: DNA-directed RNA polymerase II, core complex	3.35E-04
4	GO:0005829: cytosol	4.42E-04
5	GO:0016328: lateral plasma membrane	1.03E-03
6	GO:0030176: integral component of endoplasmic reticulum membrane	1.03E-03
7	GO:0005779: integral component of peroxisomal membrane	1.73E-03
8	GO:0005732: small nucleolar ribonucleoprotein complex	3.39E-03
9	GO:0017119: Golgi transport complex	4.40E-03
10	GO:0005945: 6-phosphofructokinase complex	7.88E-03
11	GO:0005681: spliceosomal complex	1.20E-02
12	GO:0005777: peroxisome	1.36E-02
13	GO:0033290: eukaryotic 48S preinitiation complex	1.86E-02
14	GO:0016282: eukaryotic 43S preinitiation complex	1.86E-02
15	GO:0005852: eukaryotic translation initiation factor 3 complex	2.04E-02
16	GO:0005783: endoplasmic reticulum	2.18E-02
17	GO:0009524: phragmoplast	4.38E-02