Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G060952

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006144: purine nucleobase metabolic process0.00E+00
2GO:0045694: regulation of embryo sac egg cell differentiation0.00E+00
3GO:0006572: tyrosine catabolic process0.00E+00
4GO:0045022: early endosome to late endosome transport0.00E+00
5GO:0019628: urate catabolic process0.00E+00
6GO:1902000: homogentisate catabolic process0.00E+00
7GO:0006570: tyrosine metabolic process0.00E+00
8GO:0010288: response to lead ion0.00E+00
9GO:0006367: transcription initiation from RNA polymerase II promoter1.42E-04
10GO:0007031: peroxisome organization1.98E-04
11GO:0009266: response to temperature stimulus6.24E-04
12GO:0071577: zinc II ion transmembrane transport7.35E-04
13GO:0006635: fatty acid beta-oxidation7.95E-04
14GO:0006471: protein ADP-ribosylation1.25E-03
15GO:0006491: N-glycan processing1.25E-03
16GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity1.25E-03
17GO:0010440: stomatal lineage progression1.83E-03
18GO:0035434: copper ion transmembrane transport1.83E-03
19GO:0070084: protein initiator methionine removal2.44E-03
20GO:0006559: L-phenylalanine catabolic process2.44E-03
21GO:0034755: iron ion transmembrane transport2.44E-03
22GO:0006561: proline biosynthetic process3.14E-03
23GO:0016579: protein deubiquitination3.38E-03
24GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.93E-03
25GO:0006084: acetyl-CoA metabolic process3.93E-03
26GO:0016132: brassinosteroid biosynthetic process3.93E-03
27GO:0009987: cellular process3.93E-03
28GO:0007264: small GTPase mediated signal transduction4.74E-03
29GO:0000741: karyogamy4.77E-03
30GO:0010074: maintenance of meristem identity4.77E-03
31GO:0005978: glycogen biosynthetic process5.64E-03
32GO:0006826: iron ion transport6.59E-03
33GO:0006312: mitotic recombination7.58E-03
34GO:0019915: lipid storage8.62E-03
35GO:0006913: nucleocytoplasmic transport9.65E-03
36GO:0016571: histone methylation9.72E-03
37GO:0006406: mRNA export from nucleus1.08E-02
38GO:0007030: Golgi organization1.20E-02
39GO:0015996: chlorophyll catabolic process1.20E-02
40GO:0010162: seed dormancy process1.20E-02
41GO:0009750: response to fructose1.33E-02
42GO:0050826: response to freezing1.33E-02
43GO:0006833: water transport1.33E-02
44GO:0006972: hyperosmotic response1.33E-02
45GO:0055114: oxidation-reduction process1.44E-02
46GO:0042023: DNA endoreduplication1.45E-02
47GO:0016126: sterol biosynthetic process1.45E-02
48GO:0019252: starch biosynthetic process1.57E-02
49GO:0010182: sugar mediated signaling pathway1.86E-02
50GO:0000278: mitotic cell cycle2.00E-02
51GO:0016558: protein import into peroxisome matrix2.00E-02
52GO:0006633: fatty acid biosynthetic process2.18E-02
53GO:0035556: intracellular signal transduction2.30E-02
54GO:0009845: seed germination2.30E-02
55GO:0006886: intracellular protein transport2.53E-02
56GO:0009933: meristem structural organization2.62E-02
57GO:0016567: protein ubiquitination2.72E-02
58GO:0009560: embryo sac egg cell differentiation2.78E-02
59GO:0015031: protein transport2.93E-02
60GO:0016192: vesicle-mediated transport3.34E-02
61GO:0016226: iron-sulfur cluster assembly3.83E-02
62GO:0009640: photomorphogenesis4.40E-02
63GO:0006306: DNA methylation4.60E-02
64GO:0010043: response to zinc ion4.80E-02
65GO:0009744: response to sucrose4.80E-02
66GO:0000398: mRNA splicing, via spliceosome5.00E-02
RankGO TermAdjusted P value
1GO:0009918: sterol delta7 reductase activity0.00E+00
2GO:0004411: homogentisate 1,2-dioxygenase activity0.00E+00
3GO:0032791: lead ion binding0.00E+00
4GO:0004846: urate oxidase activity0.00E+00
5GO:0035299: inositol pentakisphosphate 2-kinase activity3.13E-04
6GO:0070300: phosphatidic acid binding3.13E-04
7GO:0004645: phosphorylase activity3.13E-04
8GO:0000248: C-5 sterol desaturase activity3.13E-04
9GO:0008184: glycogen phosphorylase activity3.13E-04
10GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor3.13E-04
11GO:0004350: glutamate-5-semialdehyde dehydrogenase activity7.35E-04
12GO:0005385: zinc ion transmembrane transporter activity7.35E-04
13GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H7.35E-04
14GO:0008430: selenium binding7.35E-04
15GO:0004559: alpha-mannosidase activity7.35E-04
16GO:0000062: fatty-acyl-CoA binding1.25E-03
17GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity1.25E-03
18GO:0005375: copper ion transmembrane transporter activity1.83E-03
19GO:0070006: metalloaminopeptidase activity2.44E-03
20GO:0005381: iron ion transmembrane transporter activity2.44E-03
21GO:0051539: 4 iron, 4 sulfur cluster binding2.86E-03
22GO:0008235: metalloexopeptidase activity3.14E-03
23GO:0008878: glucose-1-phosphate adenylyltransferase activity3.14E-03
24GO:0004143: diacylglycerol kinase activity3.93E-03
25GO:0004177: aminopeptidase activity6.59E-03
26GO:0046873: metal ion transmembrane transporter activity6.59E-03
27GO:0003951: NAD+ kinase activity6.59E-03
28GO:0031418: L-ascorbic acid binding7.58E-03
29GO:0005509: calcium ion binding1.20E-02
30GO:0004713: protein tyrosine kinase activity1.33E-02
31GO:0016651: oxidoreductase activity, acting on NAD(P)H1.33E-02
32GO:0005525: GTP binding1.41E-02
33GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.45E-02
34GO:0008137: NADH dehydrogenase (ubiquinone) activity1.86E-02
35GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.00E-02
36GO:0003743: translation initiation factor activity2.03E-02
37GO:0030170: pyridoxal phosphate binding2.48E-02
38GO:0008483: transaminase activity2.78E-02
39GO:0010181: FMN binding3.12E-02
40GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor3.12E-02
41GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.25E-02
42GO:0005506: iron ion binding3.37E-02
43GO:0008234: cysteine-type peptidase activity4.80E-02
RankGO TermAdjusted P value
1GO:0005673: transcription factor TFIIE complex0.00E+00
2GO:0010009: cytoplasmic side of endosome membrane0.00E+00
3GO:0005769: early endosome3.13E-04
4GO:0010170: glucose-1-phosphate adenylyltransferase complex3.13E-04
5GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.13E-04
6GO:0005669: transcription factor TFIID complex7.35E-04
7GO:0030176: integral component of endoplasmic reticulum membrane7.35E-04
8GO:0005794: Golgi apparatus8.56E-03
9GO:0005681: spliceosomal complex8.62E-03
10GO:0005758: mitochondrial intermembrane space9.72E-03
11GO:0005886: plasma membrane2.05E-02
12GO:0005777: peroxisome3.72E-02
13GO:0045271: respiratory chain complex I5.00E-02