Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G060842

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048564: photosystem I assembly0.00E+00
2GO:0009306: protein secretion1.04E-05
3GO:0006098: pentose-phosphate shunt1.47E-05
4GO:0045087: innate immune response3.21E-05
5GO:0009658: chloroplast organization4.22E-05
6GO:0006364: rRNA processing4.63E-05
7GO:0009959: negative gravitropism8.01E-05
8GO:0030308: negative regulation of cell growth2.03E-04
9GO:0019252: starch biosynthetic process2.09E-04
10GO:0019760: glucosinolate metabolic process3.55E-04
11GO:0016075: rRNA catabolic process3.55E-04
12GO:0043067: regulation of programmed cell death3.55E-04
13GO:0000373: Group II intron splicing5.29E-04
14GO:0006598: polyamine catabolic process5.29E-04
15GO:0010304: PSII associated light-harvesting complex II catabolic process5.29E-04
16GO:0000023: maltose metabolic process8.57E-04
17GO:0009814: defense response, incompatible interaction1.17E-03
18GO:0015995: chlorophyll biosynthetic process1.23E-03
19GO:0006399: tRNA metabolic process1.41E-03
20GO:0043085: positive regulation of catalytic activity1.45E-03
21GO:0006221: pyrimidine nucleotide biosynthetic process1.67E-03
22GO:0010207: photosystem II assembly1.75E-03
23GO:0006396: RNA processing2.08E-03
24GO:0008380: RNA splicing2.20E-03
25GO:0016556: mRNA modification2.20E-03
26GO:0009416: response to light stimulus2.44E-03
27GO:0010027: thylakoid membrane organization2.44E-03
28GO:0016042: lipid catabolic process2.78E-03
29GO:0015996: chlorophyll catabolic process3.44E-03
30GO:0008299: isoprenoid biosynthetic process3.44E-03
31GO:0009630: gravitropism3.79E-03
32GO:0019684: photosynthesis, light reaction4.15E-03
33GO:0010155: regulation of proton transport4.53E-03
34GO:0010103: stomatal complex morphogenesis4.89E-03
35GO:0046777: protein autophosphorylation5.27E-03
36GO:0010363: regulation of plant-type hypersensitive response5.27E-03
37GO:0009560: embryo sac egg cell differentiation7.83E-03
38GO:0016117: carotenoid biosynthetic process9.24E-03
39GO:0009637: response to blue light9.24E-03
40GO:0009790: embryo development9.73E-03
41GO:0010114: response to red light1.02E-02
42GO:0010218: response to far red light1.13E-02
43GO:0009723: response to ethylene1.29E-02
44GO:0008652: cellular amino acid biosynthetic process1.51E-02
45GO:0009737: response to abscisic acid1.61E-02
46GO:0015031: protein transport1.81E-02
47GO:0009409: response to cold2.49E-02
48GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.98E-02
49GO:0015979: photosynthesis3.21E-02
50GO:0006184: obsolete GTP catabolic process3.61E-02
RankGO TermAdjusted P value
1GO:0098519: nucleotide phosphatase activity, acting on free nucleotides0.00E+00
2GO:0051743: red chlorophyll catabolite reductase activity0.00E+00
3GO:0004525: ribonuclease III activity1.60E-05
4GO:0008266: poly(U) RNA binding3.21E-05
5GO:0033862: UMP kinase activity8.01E-05
6GO:0005496: steroid binding2.03E-04
7GO:0046592: polyamine oxidase activity2.03E-04
8GO:0008565: protein transporter activity2.82E-04
9GO:0009041: uridylate kinase activity3.55E-04
10GO:0016817: hydrolase activity, acting on acid anhydrides9.36E-04
11GO:0003723: RNA binding2.64E-03
12GO:0051082: unfolded protein binding3.78E-03
13GO:0031072: heat shock protein binding5.67E-03
14GO:0004222: metalloendopeptidase activity6.51E-03
15GO:0020037: heme binding2.74E-02
16GO:0005525: GTP binding2.82E-02
17GO:0004601: peroxidase activity4.02E-02
18GO:0000287: magnesium ion binding4.45E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane1.18E-09
2GO:0009507: chloroplast5.47E-05
3GO:0009941: chloroplast envelope1.91E-04
4GO:0009579: thylakoid2.81E-04
5GO:0010319: stromule6.93E-04
6GO:0031977: thylakoid lumen7.46E-04
7GO:0019898: extrinsic component of membrane9.36E-04
8GO:0009654: photosystem II oxygen evolving complex1.17E-03
9GO:0009570: chloroplast stroma1.23E-03
10GO:0009543: chloroplast thylakoid lumen3.10E-03
11GO:0019013: viral nucleocapsid5.27E-03
12GO:0009706: chloroplast inner membrane6.51E-03
13GO:0009523: photosystem II8.29E-03
14GO:0009534: chloroplast thylakoid1.51E-02
15GO:0005777: peroxisome4.71E-02