Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G055320

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090342: regulation of cell aging0.00E+00
2GO:0010275: NAD(P)H dehydrogenase complex assembly0.00E+00
3GO:0006569: tryptophan catabolic process4.04E-06
4GO:0010027: thylakoid membrane organization4.16E-06
5GO:0009684: indoleacetic acid biosynthetic process2.86E-05
6GO:0016050: vesicle organization6.21E-05
7GO:0006636: unsaturated fatty acid biosynthetic process8.42E-05
8GO:0009688: abscisic acid biosynthetic process1.59E-04
9GO:0006733: oxidoreduction coenzyme metabolic process2.82E-04
10GO:0009073: aromatic amino acid family biosynthetic process3.91E-04
11GO:0045038: protein import into chloroplast thylakoid membrane4.22E-04
12GO:0051205: protein insertion into membrane4.22E-04
13GO:0009117: nucleotide metabolic process4.22E-04
14GO:0016226: iron-sulfur cluster assembly5.31E-04
15GO:0060416: response to growth hormone5.78E-04
16GO:0019748: secondary metabolic process5.78E-04
17GO:0009306: protein secretion7.50E-04
18GO:0015995: chlorophyll biosynthetic process8.83E-04
19GO:0009108: coenzyme biosynthetic process9.34E-04
20GO:0010206: photosystem II repair9.34E-04
21GO:0009106: lipoate metabolic process9.34E-04
22GO:0009704: de-etiolation9.34E-04
23GO:0006766: vitamin metabolic process9.34E-04
24GO:0048527: lateral root development1.78E-03
25GO:0009567: double fertilization forming a zygote and endosperm1.78E-03
26GO:0006974: cellular response to DNA damage stimulus2.01E-03
27GO:0006546: glycine catabolic process2.01E-03
28GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.30E-03
29GO:0030154: cell differentiation3.31E-03
30GO:0006310: DNA recombination3.61E-03
31GO:0006139: nucleobase-containing compound metabolic process4.23E-03
32GO:0009695: jasmonic acid biosynthetic process4.56E-03
33GO:0019344: cysteine biosynthetic process7.39E-03
34GO:0016117: carotenoid biosynthetic process7.39E-03
35GO:0009658: chloroplast organization9.83E-03
36GO:0006812: cation transport1.21E-02
37GO:0043085: positive regulation of catalytic activity1.35E-02
38GO:0009965: leaf morphogenesis1.40E-02
39GO:0045893: positive regulation of transcription, DNA-templated1.70E-02
40GO:0006098: pentose-phosphate shunt2.38E-02
41GO:0080167: response to karrikin2.50E-02
42GO:0015979: photosynthesis2.56E-02
43GO:0006281: DNA repair3.00E-02
44GO:0006364: rRNA processing3.54E-02
45GO:0006508: proteolysis4.47E-02
RankGO TermAdjusted P value
1GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.86E-05
2GO:0004765: shikimate kinase activity4.22E-04
3GO:0005216: ion channel activity3.02E-03
4GO:0008565: protein transporter activity4.56E-03
5GO:0004364: glutathione transferase activity8.98E-03
6GO:0004252: serine-type endopeptidase activity1.97E-02
7GO:0016788: hydrolase activity, acting on ester bonds2.08E-02
RankGO TermAdjusted P value
1GO:0031361: integral component of thylakoid membrane0.00E+00
2GO:0043235: receptor complex0.00E+00
3GO:0009535: chloroplast thylakoid membrane1.79E-07
4GO:0009507: chloroplast8.61E-06
5GO:0009534: chloroplast thylakoid3.99E-05
6GO:0009543: chloroplast thylakoid lumen7.05E-05
7GO:0031977: thylakoid lumen5.31E-04
8GO:0009508: plastid chromosome5.78E-04
9GO:0009295: nucleoid2.01E-03
10GO:0009706: chloroplast inner membrane5.20E-03
11GO:0009579: thylakoid1.06E-02
12GO:0010287: plastoglobule1.21E-02
13GO:0009536: plastid1.31E-02
14GO:0009570: chloroplast stroma1.64E-02
15GO:0005777: peroxisome3.74E-02