Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G054380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009755: hormone-mediated signaling pathway1.40E-05
2GO:0009909: regulation of flower development5.96E-05
3GO:0009934: regulation of meristem structural organization1.04E-04
4GO:0048449: floral organ formation1.28E-04
5GO:0010074: maintenance of meristem identity1.28E-04
6GO:0016572: histone phosphorylation1.55E-04
7GO:0010048: vernalization response2.13E-04
8GO:0007020: microtubule nucleation2.44E-04
9GO:0019915: lipid storage2.44E-04
10GO:0016571: histone methylation2.77E-04
11GO:0010389: regulation of G2/M transition of mitotic cell cycle2.77E-04
12GO:0031048: chromatin silencing by small RNA3.11E-04
13GO:0006406: mRNA export from nucleus3.11E-04
14GO:0010162: seed dormancy process3.46E-04
15GO:0050826: response to freezing3.81E-04
16GO:0007062: sister chromatid cohesion3.81E-04
17GO:0006261: DNA-dependent DNA replication3.81E-04
18GO:0010182: sugar mediated signaling pathway5.34E-04
19GO:0006346: methylation-dependent chromatin silencing5.76E-04
20GO:0009845: seed germination6.61E-04
21GO:0009933: meristem structural organization7.50E-04
22GO:0009560: embryo sac egg cell differentiation7.95E-04
23GO:0007049: cell cycle8.42E-04
24GO:0016579: protein deubiquitination8.89E-04
25GO:0051567: histone H3-K9 methylation1.19E-03
26GO:0009640: photomorphogenesis1.24E-03
27GO:0006306: DNA methylation1.30E-03
28GO:0008283: cell proliferation1.52E-03
29GO:0051301: cell division1.52E-03
30GO:0010228: vegetative to reproductive phase transition of meristem1.57E-03
31GO:0045893: positive regulation of transcription, DNA-templated2.09E-03
32GO:0006260: DNA replication2.46E-03
33GO:0006334: nucleosome assembly3.53E-03
34GO:0016567: protein ubiquitination3.60E-03
35GO:0009793: embryo development ending in seed dormancy6.22E-03
RankGO TermAdjusted P value
1GO:0004693: cyclin-dependent protein serine/threonine kinase activity5.00E-06
2GO:0003887: DNA-directed DNA polymerase activity1.28E-04
3GO:0004721: phosphoprotein phosphatase activity1.86E-03
4GO:0008017: microtubule binding2.27E-03
5GO:0046982: protein heterodimerization activity4.57E-03
6GO:0003677: DNA binding2.13E-02
7GO:0004674: protein serine/threonine kinase activity3.28E-02
8GO:0016772: transferase activity, transferring phosphorus-containing groups4.87E-02
RankGO TermAdjusted P value
1GO:0000307: cyclin-dependent protein kinase holoenzyme complex0.00E+00
2GO:0005635: nuclear envelope6.61E-04
3GO:0000786: nucleosome3.22E-03
4GO:0005730: nucleolus3.50E-03
5GO:0005694: chromosome4.07E-03