Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G050570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071486: cellular response to high light intensity0.00E+00
2GO:0009234: menaquinone biosynthetic process0.00E+00
3GO:0006436: tryptophanyl-tRNA aminoacylation0.00E+00
4GO:0010207: photosystem II assembly1.45E-05
5GO:0010027: thylakoid membrane organization2.97E-05
6GO:0010206: photosystem II repair3.36E-05
7GO:0006412: translation7.52E-05
8GO:0006434: seryl-tRNA aminoacylation1.26E-04
9GO:0009069: serine family amino acid metabolic process1.26E-04
10GO:0019676: ammonia assimilation cycle1.26E-04
11GO:0045036: protein targeting to chloroplast1.69E-04
12GO:0010236: plastoquinone biosynthetic process3.13E-04
13GO:0032544: plastid translation3.13E-04
14GO:0042372: phylloquinone biosynthetic process3.13E-04
15GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.13E-04
16GO:0019684: photosynthesis, light reaction3.24E-04
17GO:0010155: regulation of proton transport3.71E-04
18GO:0016024: CDP-diacylglycerol biosynthetic process5.38E-04
19GO:0034599: cellular response to oxidative stress5.38E-04
20GO:0006098: pentose-phosphate shunt6.61E-04
21GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway6.61E-04
22GO:0010189: vitamin E biosynthetic process1.09E-03
23GO:0000096: sulfur amino acid metabolic process1.09E-03
24GO:0050790: regulation of catalytic activity1.09E-03
25GO:0007568: aging1.09E-03
26GO:0016226: iron-sulfur cluster assembly1.37E-03
27GO:0006364: rRNA processing1.39E-03
28GO:0007005: mitochondrion organization1.40E-03
29GO:0006542: glutamine biosynthetic process1.40E-03
30GO:0048481: plant ovule development1.57E-03
31GO:0006418: tRNA aminoacylation for protein translation1.67E-03
32GO:0009658: chloroplast organization1.67E-03
33GO:0009814: defense response, incompatible interaction1.74E-03
34GO:0006801: superoxide metabolic process1.74E-03
35GO:0015995: chlorophyll biosynthetic process2.20E-03
36GO:0010228: vegetative to reproductive phase transition of meristem2.32E-03
37GO:0048868: pollen tube development2.45E-03
38GO:0043085: positive regulation of catalytic activity2.57E-03
39GO:0009407: toxin catabolic process2.84E-03
40GO:0009697: salicylic acid biosynthetic process3.27E-03
41GO:0006354: DNA-templated transcription, elongation3.27E-03
42GO:0016556: mRNA modification3.27E-03
43GO:0042793: transcription from plastid promoter4.68E-03
44GO:0042742: defense response to bacterium5.12E-03
45GO:0007030: Golgi organization5.17E-03
46GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.17E-03
47GO:0006636: unsaturated fatty acid biosynthetic process5.17E-03
48GO:0009750: response to fructose5.69E-03
49GO:0006833: water transport5.69E-03
50GO:0006972: hyperosmotic response5.69E-03
51GO:0042545: cell wall modification5.69E-03
52GO:0030154: cell differentiation6.23E-03
53GO:0009749: response to glucose6.23E-03
54GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione6.79E-03
55GO:0035304: regulation of protein dephosphorylation7.95E-03
56GO:0046777: protein autophosphorylation7.95E-03
57GO:0006807: nitrogen compound metabolic process7.95E-03
58GO:0009817: defense response to fungus, incompatible interaction8.56E-03
59GO:0009409: response to cold9.34E-03
60GO:0009902: chloroplast relocation1.11E-02
61GO:0009735: response to cytokinin1.25E-02
62GO:0006662: glycerol ether metabolic process1.32E-02
63GO:0019344: cysteine biosynthetic process1.40E-02
64GO:0016117: carotenoid biosynthetic process1.40E-02
65GO:0009637: response to blue light1.40E-02
66GO:0009790: embryo development1.47E-02
67GO:0010114: response to red light1.55E-02
68GO:0010218: response to far red light1.70E-02
69GO:0009793: embryo development ending in seed dormancy1.78E-02
70GO:0000023: maltose metabolic process1.78E-02
71GO:0009744: response to sucrose2.03E-02
72GO:0008652: cellular amino acid biosynthetic process2.29E-02
73GO:0009644: response to high light intensity2.38E-02
74GO:0009965: leaf morphogenesis2.66E-02
75GO:0045893: positive regulation of transcription, DNA-templated3.24E-02
76GO:0006979: response to oxidative stress3.61E-02
77GO:0009416: response to light stimulus3.76E-02
78GO:0019252: starch biosynthetic process3.87E-02
RankGO TermAdjusted P value
1GO:0004830: tryptophan-tRNA ligase activity0.00E+00
2GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity0.00E+00
3GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
4GO:0004802: transketolase activity0.00E+00
5GO:0004828: serine-tRNA ligase activity1.26E-04
6GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.26E-04
7GO:0004605: phosphatidate cytidylyltransferase activity3.13E-04
8GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.13E-04
9GO:0030234: enzyme regulator activity1.09E-03
10GO:0003735: structural constituent of ribosome1.22E-03
11GO:0004356: glutamate-ammonia ligase activity1.40E-03
12GO:0004812: aminoacyl-tRNA ligase activity1.87E-03
13GO:0004784: superoxide dismutase activity2.08E-03
14GO:0042578: phosphoric ester hydrolase activity2.45E-03
15GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.84E-03
16GO:0043531: ADP binding3.72E-03
17GO:0016874: ligase activity4.16E-03
18GO:0003993: acid phosphatase activity4.19E-03
19GO:0019901: protein kinase binding5.69E-03
20GO:0016779: nucleotidyltransferase activity2.94E-02
21GO:0015035: protein disulfide oxidoreductase activity3.14E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast4.12E-14
2GO:0009570: chloroplast stroma1.86E-13
3GO:0009941: chloroplast envelope2.89E-12
4GO:0009579: thylakoid2.04E-08
5GO:0009543: chloroplast thylakoid lumen3.68E-06
6GO:0009535: chloroplast thylakoid membrane5.07E-06
7GO:0005840: ribosome4.22E-04
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.40E-03
9GO:0030529: intracellular ribonucleoprotein complex3.38E-03
10GO:0009295: nucleoid3.72E-03
11GO:0048046: apoplast1.11E-02
12GO:0010319: stromule1.55E-02
13GO:0015935: small ribosomal subunit1.62E-02
14GO:0031977: thylakoid lumen1.62E-02
15GO:0009534: chloroplast thylakoid2.29E-02
16GO:0010287: plastoglobule2.29E-02