co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G050371

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	0.00E+00
2	GO:0042780: tRNA 3'-end processing	0.00E+00
3	GO:1900865: chloroplast RNA modification	0.00E+00
4	GO:0043686: co-translational protein modification	0.00E+00
5	GO:0048564: photosystem I assembly	0.00E+00
6	GO:0046653: tetrahydrofolate metabolic process	0.00E+00
7	GO:0043953: protein transport by the Tat complex	0.00E+00
8	GO:0000372: Group I intron splicing	0.00E+00
9	GO:0046506: sulfolipid biosynthetic process	0.00E+00
10	GO:0009658: chloroplast organization	3.07E-09
11	GO:0006457: protein folding	2.08E-08
12	GO:0006364: rRNA processing	4.48E-06
13	GO:0009306: protein secretion	6.47E-06
14	GO:0006399: tRNA metabolic process	2.10E-05
15	GO:0010027: thylakoid membrane organization	3.48E-05
16	GO:0006779: porphyrin-containing compound biosynthetic process	9.55E-05
17	GO:0000373: Group II intron splicing	1.19E-04
18	GO:0006782: protoporphyrinogen IX biosynthetic process	1.19E-04
19	GO:0045036: protein targeting to chloroplast	1.26E-04
20	GO:0010468: regulation of gene expression	2.11E-04
21	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	6.82E-04
22	GO:0006591: ornithine metabolic process	6.82E-04
23	GO:0009959: negative gravitropism	6.82E-04
24	GO:0018160: peptidyl-pyrromethane cofactor linkage	6.82E-04
25	GO:0032543: mitochondrial translation	6.82E-04
26	GO:0009407: toxin catabolic process	1.07E-03
27	GO:0016556: mRNA modification	1.33E-03
28	GO:0009642: response to light intensity	1.58E-03
29	GO:0010380: regulation of chlorophyll biosynthetic process	1.58E-03
30	GO:1901671: positive regulation of superoxide dismutase activity	1.58E-03
31	GO:0030308: negative regulation of cell growth	1.58E-03
32	GO:0019481: L-alanine catabolic process, by transamination	1.58E-03
33	GO:0042793: transcription from plastid promoter	2.23E-03
34	GO:0051607: defense response to virus	2.23E-03
35	GO:0008299: isoprenoid biosynthetic process	2.58E-03
36	GO:0019760: glucosinolate metabolic process	2.60E-03
37	GO:0000304: response to singlet oxygen	2.60E-03
38	GO:0006450: regulation of translational fidelity	2.60E-03
39	GO:0051085: chaperone mediated protein folding requiring cofactor	2.60E-03
40	GO:0010731: protein glutathionylation	2.60E-03
41	GO:0016075: rRNA catabolic process	2.60E-03
42	GO:0009231: riboflavin biosynthetic process	2.60E-03
43	GO:0009247: glycolipid biosynthetic process	2.60E-03
44	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.73E-03
45	GO:0006241: CTP biosynthetic process	3.85E-03
46	GO:0045038: protein import into chloroplast thylakoid membrane	3.85E-03
47	GO:0042026: protein refolding	3.85E-03
48	GO:0006165: nucleoside diphosphate phosphorylation	3.85E-03
49	GO:0006228: UTP biosynthetic process	3.85E-03
50	GO:0045037: protein import into chloroplast stroma	3.85E-03
51	GO:0019375: galactolipid biosynthetic process	3.85E-03
52	GO:0006183: GTP biosynthetic process	3.85E-03
53	GO:0010267: production of ta-siRNAs involved in RNA interference	3.87E-03
54	GO:0035196: production of miRNAs involved in gene silencing by miRNA	3.87E-03
55	GO:0044267: cellular protein metabolic process	3.87E-03
56	GO:0009627: systemic acquired resistance	4.37E-03
57	GO:0010207: photosystem II assembly	6.08E-03
58	GO:0031347: regulation of defense response	6.79E-03
59	GO:0000105: histidine biosynthetic process	6.79E-03
60	GO:0006749: glutathione metabolic process	6.79E-03
61	GO:0045893: positive regulation of transcription, DNA-templated	7.26E-03
62	GO:0009902: chloroplast relocation	8.00E-03
63	GO:0009411: response to UV	8.47E-03
64	GO:0010583: response to cyclopentenone	8.47E-03
65	GO:0033014: tetrapyrrole biosynthetic process	8.47E-03
66	GO:0006189: 'de novo' IMP biosynthetic process	8.47E-03
67	GO:0034660: ncRNA metabolic process	8.47E-03
68	GO:0006801: superoxide metabolic process	8.47E-03
69	GO:0032880: regulation of protein localization	8.47E-03
70	GO:0009735: response to cytokinin	9.49E-03
71	GO:0019252: starch biosynthetic process	9.99E-03
72	GO:0051604: protein maturation	1.03E-02
73	GO:0045087: innate immune response	1.22E-02
74	GO:0001666: response to hypoxia	1.22E-02
75	GO:0009585: red, far-red light phototransduction	1.22E-02
76	GO:0000302: response to reactive oxygen species	1.43E-02
77	GO:0000023: maltose metabolic process	1.58E-02
78	GO:0009723: response to ethylene	1.79E-02
79	GO:0009409: response to cold	2.06E-02
80	GO:0045454: cell redox homeostasis	2.18E-02
81	GO:0015995: chlorophyll biosynthetic process	2.26E-02
82	GO:0006655: phosphatidylglycerol biosynthetic process	2.37E-02
83	GO:0031408: oxylipin biosynthetic process	2.37E-02
84	GO:0009630: gravitropism	2.90E-02
85	GO:0019684: photosynthesis, light reaction	3.18E-02
86	GO:0009657: plastid organization	3.18E-02
87	GO:0016036: cellular response to phosphate starvation	3.47E-02
88	GO:0008219: cell death	3.47E-02
89	GO:0010103: stomatal complex morphogenesis	3.77E-02
90	GO:0006396: RNA processing	3.85E-02
91	GO:0009058: biosynthetic process	3.97E-02
92	GO:0035304: regulation of protein dephosphorylation	4.08E-02
93	GO:0006869: lipid transport	4.40E-02
94	GO:0009416: response to light stimulus	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0009977: proton motive force dependent protein transmembrane transporter activity	0.00E+00
2	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
3	GO:0003919: FMN adenylyltransferase activity	0.00E+00
4	GO:0003879: ATP phosphoribosyltransferase activity	0.00E+00
5	GO:0042781: 3'-tRNA processing endoribonuclease activity	0.00E+00
6	GO:0008864: formyltetrahydrofolate deformylase activity	0.00E+00
7	GO:0042586: peptide deformylase activity	0.00E+00
8	GO:0004109: coproporphyrinogen oxidase activity	0.00E+00
9	GO:0004853: uroporphyrinogen decarboxylase activity	1.54E-05
10	GO:0000774: adenyl-nucleotide exchange factor activity	5.40E-05
11	GO:0016817: hydrolase activity, acting on acid anhydrides	3.29E-04
12	GO:0004525: ribonuclease III activity	4.75E-04
13	GO:0008565: protein transporter activity	5.95E-04
14	GO:0051087: chaperone binding	6.45E-04
15	GO:0045174: glutathione dehydrogenase (ascorbate) activity	6.82E-04
16	GO:0005471: ATP:ADP antiporter activity	6.82E-04
17	GO:0004362: glutathione-disulfide reductase activity	6.82E-04
18	GO:0004585: ornithine carbamoyltransferase activity	6.82E-04
19	GO:0008146: sulfotransferase activity	6.82E-04
20	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	6.82E-04
21	GO:0004418: hydroxymethylbilane synthase activity	6.82E-04
22	GO:0051082: unfolded protein binding	7.12E-04
23	GO:0005496: steroid binding	1.58E-03
24	GO:0016630: protochlorophyllide reductase activity	1.58E-03
25	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.58E-03
26	GO:0047134: protein-disulfide reductase activity	1.58E-03
27	GO:0004462: lactoylglutathione lyase activity	1.58E-03
28	GO:0003959: NADPH dehydrogenase activity	2.60E-03
29	GO:0016743: carboxyl- or carbamoyltransferase activity	2.60E-03
30	GO:0016831: carboxy-lyase activity	2.97E-03
31	GO:0004550: nucleoside diphosphate kinase activity	3.85E-03
32	GO:0070569: uridylyltransferase activity	3.85E-03
33	GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	3.85E-03
34	GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor	8.47E-03
35	GO:0004252: serine-type endopeptidase activity	9.50E-03
36	GO:0004784: superoxide dismutase activity	1.03E-02
37	GO:0043022: ribosome binding	1.03E-02
38	GO:0008266: poly(U) RNA binding	1.22E-02
39	GO:0005507: copper ion binding	1.41E-02
40	GO:0046914: transition metal ion binding	1.65E-02
41	GO:0003690: double-stranded DNA binding	1.88E-02
42	GO:0005525: GTP binding	2.54E-02
43	GO:0042803: protein homodimerization activity	2.65E-02
44	GO:0000287: magnesium ion binding	2.71E-02
45	GO:0015035: protein disulfide oxidoreductase activity	3.52E-02
46	GO:0031072: heat shock protein binding	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0055035: plastid thylakoid membrane	0.00E+00
2	GO:0042646: plastid nucleoid	0.00E+00
3	GO:0009507: chloroplast	6.02E-19
4	GO:0009941: chloroplast envelope	2.97E-12
5	GO:0009570: chloroplast stroma	3.86E-11
6	GO:0009535: chloroplast thylakoid membrane	1.80E-07
7	GO:0009579: thylakoid	2.83E-07
8	GO:0009532: plastid stroma	2.10E-05
9	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	6.82E-04
10	GO:0009526: plastid envelope	6.82E-04
11	GO:0005759: mitochondrial matrix	1.01E-03
12	GO:0010319: stromule	1.87E-03
13	GO:0031977: thylakoid lumen	2.04E-03
14	GO:0009536: plastid	3.47E-03
15	GO:0009840: chloroplastic endopeptidase Clp complex	5.24E-03
16	GO:0019898: extrinsic component of membrane	6.79E-03
17	GO:0009654: photosystem II oxygen evolving complex	8.47E-03
18	GO:0005739: mitochondrion	1.13E-02
19	GO:0009295: nucleoid	1.88E-02
20	GO:0009534: chloroplast thylakoid	2.26E-02
21	GO:0009543: chloroplast thylakoid lumen	2.37E-02