co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G049495

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010165: response to X-ray	0.00E+00
2	GO:0009103: lipopolysaccharide biosynthetic process	0.00E+00
3	GO:0042273: ribosomal large subunit biogenesis	0.00E+00
4	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
5	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
6	GO:0043087: regulation of GTPase activity	0.00E+00
7	GO:0006367: transcription initiation from RNA polymerase II promoter	6.25E-04
8	GO:0006378: mRNA polyadenylation	8.22E-04
9	GO:0007112: male meiosis cytokinesis	8.22E-04
10	GO:0080141: regulation of jasmonic acid biosynthetic process	8.22E-04
11	GO:0051512: positive regulation of unidimensional cell growth	8.22E-04
12	GO:0009168: purine ribonucleoside monophosphate biosynthetic process	8.22E-04
13	GO:0010587: miRNA catabolic process	8.22E-04
14	GO:0032264: IMP salvage	8.22E-04
15	GO:0009968: negative regulation of signal transduction	8.22E-04
16	GO:0043157: response to cation stress	8.22E-04
17	GO:0006826: iron ion transport	1.40E-03
18	GO:0071577: zinc II ion transmembrane transport	1.88E-03
19	GO:0010109: regulation of photosynthesis	1.88E-03
20	GO:0080170: hydrogen peroxide transmembrane transport	1.88E-03
21	GO:0034389: lipid particle organization	1.88E-03
22	GO:0016571: histone methylation	2.46E-03
23	GO:0006491: N-glycan processing	3.12E-03
24	GO:0045727: positive regulation of translation	3.12E-03
25	GO:0006168: adenine salvage	3.12E-03
26	GO:0006188: IMP biosynthetic process	3.12E-03
27	GO:0007032: endosome organization	3.12E-03
28	GO:0009646: response to absence of light	3.12E-03
29	GO:0010152: pollen maturation	3.12E-03
30	GO:0006833: water transport	3.91E-03
31	GO:0006972: hyperosmotic response	3.91E-03
32	GO:0035434: copper ion transmembrane transport	4.64E-03
33	GO:0006401: RNA catabolic process	4.64E-03
34	GO:0042256: mature ribosome assembly	4.64E-03
35	GO:0008654: phospholipid biosynthetic process	4.64E-03
36	GO:0006790: sulfur compound metabolic process	4.64E-03
37	GO:0009624: response to nematode	5.41E-03
38	GO:0006461: protein complex assembly	6.30E-03
39	GO:0034755: iron ion transmembrane transport	6.30E-03
40	GO:0070084: protein initiator methionine removal	6.30E-03
41	GO:0010072: primary shoot apical meristem specification	6.30E-03
42	GO:0009867: jasmonic acid mediated signaling pathway	7.12E-03
43	GO:0051276: chromosome organization	8.18E-03
44	GO:0006561: proline biosynthetic process	8.18E-03
45	GO:0019432: triglyceride biosynthetic process	8.18E-03
46	GO:0035556: intracellular signal transduction	8.70E-03
47	GO:0016132: brassinosteroid biosynthetic process	1.02E-02
48	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.02E-02
49	GO:0009987: cellular process	1.02E-02
50	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.02E-02
51	GO:0006084: acetyl-CoA metabolic process	1.02E-02
52	GO:0030422: production of siRNA involved in RNA interference	1.02E-02
53	GO:0010025: wax biosynthetic process	1.02E-02
54	GO:0000165: MAPK cascade	1.04E-02
55	GO:0007031: peroxisome organization	1.24E-02
56	GO:0000741: karyogamy	1.24E-02
57	GO:0010311: lateral root formation	1.24E-02
58	GO:0010074: maintenance of meristem identity	1.24E-02
59	GO:0010310: regulation of hydrogen peroxide metabolic process	1.24E-02
60	GO:0009615: response to virus	1.24E-02
61	GO:0005985: sucrose metabolic process	1.24E-02
62	GO:0009628: response to abiotic stimulus	1.24E-02
63	GO:0016579: protein deubiquitination	1.34E-02
64	GO:0006413: translational initiation	1.47E-02
65	GO:0010029: regulation of seed germination	1.48E-02
66	GO:0040007: growth	1.48E-02
67	GO:0015977: carbon fixation	1.48E-02
68	GO:0006302: double-strand break repair	1.48E-02
69	GO:0010118: stomatal movement	1.72E-02
70	GO:0010051: xylem and phloem pattern formation	1.72E-02
71	GO:0009116: nucleoside metabolic process	1.99E-02
72	GO:0006312: mitotic recombination	1.99E-02
73	GO:0019915: lipid storage	2.27E-02
74	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.27E-02
75	GO:0009793: embryo development ending in seed dormancy	2.29E-02
76	GO:0010389: regulation of G2/M transition of mitotic cell cycle	2.56E-02
77	GO:0007033: vacuole organization	2.56E-02
78	GO:0009266: response to temperature stimulus	2.56E-02
79	GO:0046854: phosphatidylinositol phosphorylation	2.56E-02
80	GO:0000398: mRNA splicing, via spliceosome	2.63E-02
81	GO:0006406: mRNA export from nucleus	2.86E-02
82	GO:0006970: response to osmotic stress	3.11E-02
83	GO:0006636: unsaturated fatty acid biosynthetic process	3.18E-02
84	GO:0010162: seed dormancy process	3.18E-02
85	GO:0006446: regulation of translational initiation	3.18E-02
86	GO:0007030: Golgi organization	3.18E-02
87	GO:0001731: formation of translation preinitiation complex	3.50E-02
88	GO:0007062: sister chromatid cohesion	3.50E-02
89	GO:0006261: DNA-dependent DNA replication	3.50E-02
90	GO:0016049: cell growth	3.50E-02
91	GO:0050826: response to freezing	3.50E-02
92	GO:0016192: vesicle-mediated transport	3.64E-02
93	GO:0006913: nucleocytoplasmic transport	3.81E-02
94	GO:0016126: sterol biosynthetic process	3.84E-02
95	GO:0000724: double-strand break repair via homologous recombination	3.84E-02
96	GO:0034968: histone lysine methylation	3.84E-02
97	GO:0009749: response to glucose	3.84E-02
98	GO:0000902: cell morphogenesis	3.84E-02
99	GO:0009966: regulation of signal transduction	4.20E-02
100	GO:0009269: response to desiccation	4.20E-02
101	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	4.20E-02
102	GO:0009739: response to gibberellin	4.20E-02
103	GO:0006612: protein targeting to membrane	4.56E-02
104	GO:0009408: response to heat	4.74E-02
105	GO:0009414: response to water deprivation	4.88E-02
106	GO:0010363: regulation of plant-type hypersensitive response	4.93E-02
107	GO:0035304: regulation of protein dephosphorylation	4.93E-02
108	GO:0010182: sugar mediated signaling pathway	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
2	GO:0009918: sterol delta7 reductase activity	0.00E+00
3	GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity	0.00E+00
4	GO:0000248: C-5 sterol desaturase activity	8.22E-04
5	GO:0004435: phosphatidylinositol phospholipase C activity	8.22E-04
6	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	8.22E-04
7	GO:0003876: AMP deaminase activity	8.22E-04
8	GO:0035299: inositol pentakisphosphate 2-kinase activity	8.22E-04
9	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	8.22E-04
10	GO:0004708: MAP kinase kinase activity	8.22E-04
11	GO:0019905: syntaxin binding	8.22E-04
12	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	8.22E-04
13	GO:0043023: ribosomal large subunit binding	8.22E-04
14	GO:0043022: ribosome binding	8.50E-04
15	GO:0031418: L-ascorbic acid binding	1.73E-03
16	GO:0019204: obsolete nucleotide phosphatase activity	1.88E-03
17	GO:0019239: deaminase activity	1.88E-03
18	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	1.88E-03
19	GO:0005385: zinc ion transmembrane transporter activity	1.88E-03
20	GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H	1.88E-03
21	GO:0008430: selenium binding	1.88E-03
22	GO:0004559: alpha-mannosidase activity	1.88E-03
23	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	3.12E-03
24	GO:0003999: adenine phosphoribosyltransferase activity	3.12E-03
25	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	3.12E-03
26	GO:0003743: translation initiation factor activity	4.39E-03
27	GO:0008964: phosphoenolpyruvate carboxylase activity	4.64E-03
28	GO:0005375: copper ion transmembrane transporter activity	4.64E-03
29	GO:0005381: iron ion transmembrane transporter activity	6.30E-03
30	GO:0070006: metalloaminopeptidase activity	6.30E-03
31	GO:0031072: heat shock protein binding	7.12E-03
32	GO:0016881: acid-amino acid ligase activity	8.05E-03
33	GO:0003729: mRNA binding	8.18E-03
34	GO:0008235: metalloexopeptidase activity	8.18E-03
35	GO:0004143: diacylglycerol kinase activity	1.02E-02
36	GO:0019904: protein domain specific binding	1.24E-02
37	GO:0004197: cysteine-type endopeptidase activity	1.24E-02
38	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.48E-02
39	GO:0046873: metal ion transmembrane transporter activity	1.72E-02
40	GO:0003951: NAD+ kinase activity	1.72E-02
41	GO:0004177: aminopeptidase activity	1.72E-02
42	GO:0018024: histone-lysine N-methyltransferase activity	2.27E-02
43	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.86E-02
44	GO:0042803: protein homodimerization activity	3.45E-02
45	GO:0016651: oxidoreductase activity, acting on NAD(P)H	3.50E-02
46	GO:0004713: protein tyrosine kinase activity	3.50E-02
47	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.52E-02
48	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.63E-02
49	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.84E-02
50	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4.20E-02
51	GO:0008137: NADH dehydrogenase (ubiquinone) activity	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0032783: ELL-EAF complex	0.00E+00
2	GO:0005673: transcription factor TFIIE complex	0.00E+00
3	GO:0031307: integral component of mitochondrial outer membrane	8.22E-04
4	GO:0005849: mRNA cleavage factor complex	8.22E-04
5	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	8.22E-04
6	GO:0005669: transcription factor TFIID complex	1.88E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	1.88E-03
8	GO:0030915: Smc5-Smc6 complex	4.64E-03
9	GO:0005732: small nucleolar ribonucleoprotein complex	6.30E-03
10	GO:0005771: multivesicular body	8.18E-03
11	GO:0000418: DNA-directed RNA polymerase IV complex	1.02E-02
12	GO:0005665: DNA-directed RNA polymerase II, core complex	1.24E-02
13	GO:0009524: phragmoplast	1.34E-02
14	GO:0005829: cytosol	1.69E-02
15	GO:0005681: spliceosomal complex	2.27E-02
16	GO:0005794: Golgi apparatus	2.29E-02
17	GO:0005758: mitochondrial intermembrane space	2.56E-02
18	GO:0033290: eukaryotic 48S preinitiation complex	3.50E-02
19	GO:0016282: eukaryotic 43S preinitiation complex	3.50E-02
20	GO:0005852: eukaryotic translation initiation factor 3 complex	3.84E-02