Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G048366

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000075: cell cycle checkpoint0.00E+00
2GO:0048359: mucilage metabolic process involved in seed coat development1.41E-06
3GO:0001578: microtubule bundle formation1.80E-04
4GO:0000077: DNA damage checkpoint1.80E-04
5GO:0046785: microtubule polymerization1.80E-04
6GO:0080001: mucilage extrusion from seed coat1.80E-04
7GO:0097502: mannosylation1.80E-04
8GO:0031116: positive regulation of microtubule polymerization1.80E-04
9GO:0006567: threonine catabolic process1.80E-04
10GO:0051322: anaphase1.80E-04
11GO:0040020: regulation of meiotic nuclear division1.80E-04
12GO:0010192: mucilage biosynthetic process4.36E-04
13GO:0034389: lipid particle organization4.36E-04
14GO:0016125: sterol metabolic process4.36E-04
15GO:0030643: cellular phosphate ion homeostasis4.36E-04
16GO:0010109: regulation of photosynthesis4.36E-04
17GO:0000910: cytokinesis6.05E-04
18GO:0010152: pollen maturation7.46E-04
19GO:0010214: seed coat development1.11E-03
20GO:0008654: phospholipid biosynthetic process1.11E-03
21GO:0035434: copper ion transmembrane transport1.11E-03
22GO:0006825: copper ion transport1.50E-03
23GO:0048229: gametophyte development1.92E-03
24GO:0007155: cell adhesion2.35E-03
25GO:0048449: floral organ formation2.83E-03
26GO:0048765: root hair cell differentiation3.37E-03
27GO:0008284: positive regulation of cell proliferation3.93E-03
28GO:0010051: xylem and phloem pattern formation3.93E-03
29GO:0045010: actin nucleation4.53E-03
30GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.13E-03
31GO:0007020: microtubule nucleation5.13E-03
32GO:0019915: lipid storage5.13E-03
33GO:0007033: vacuole organization5.77E-03
34GO:0006289: nucleotide-excision repair6.45E-03
35GO:0051607: defense response to virus6.45E-03
36GO:0010162: seed dormancy process7.15E-03
37GO:0050826: response to freezing7.87E-03
38GO:0042023: DNA endoreduplication8.61E-03
39GO:0009749: response to glucose8.61E-03
40GO:0006310: DNA recombination9.39E-03
41GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.02E-02
42GO:0010182: sugar mediated signaling pathway1.10E-02
43GO:0010090: trichome morphogenesis1.10E-02
44GO:0000278: mitotic cell cycle1.18E-02
45GO:0009553: embryo sac development1.18E-02
46GO:0051258: protein polymerization1.18E-02
47GO:0006281: DNA repair1.29E-02
48GO:0007017: microtubule-based process1.36E-02
49GO:0009845: seed germination1.36E-02
50GO:0009725: response to hormone1.36E-02
51GO:0031047: gene silencing by RNA1.45E-02
52GO:0006520: cellular amino acid metabolic process1.55E-02
53GO:0009933: meristem structural organization1.55E-02
54GO:0000226: microtubule cytoskeleton organization1.64E-02
55GO:0009733: response to auxin1.67E-02
56GO:0043086: negative regulation of catalytic activity2.37E-02
57GO:0009640: photomorphogenesis2.59E-02
58GO:0009744: response to sucrose2.83E-02
59GO:0009793: embryo development ending in seed dormancy2.84E-02
60GO:0009908: flower development3.07E-02
61GO:0009624: response to nematode3.19E-02
62GO:0051301: cell division3.19E-02
63GO:0006812: cation transport3.19E-02
64GO:0010228: vegetative to reproductive phase transition of meristem3.32E-02
65GO:0007018: microtubule-based movement3.44E-02
66GO:0006913: nucleocytoplasmic transport3.83E-02
67GO:0007275: multicellular organism development3.83E-02
68GO:0009555: pollen development4.10E-02
69GO:0044237: cellular metabolic process4.65E-02
70GO:0006886: intracellular protein transport4.65E-02
71GO:0050832: defense response to fungus4.65E-02
RankGO TermAdjusted P value
1GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity0.00E+00
2GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity0.00E+00
3GO:0051753: mannan synthase activity0.00E+00
4GO:0004793: threonine aldolase activity0.00E+00
5GO:0047259: glucomannan 4-beta-mannosyltransferase activity0.00E+00
6GO:0032942: inositol tetrakisphosphate 2-kinase activity0.00E+00
7GO:0035299: inositol pentakisphosphate 2-kinase activity1.80E-04
8GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.80E-04
9GO:0000247: C-8 sterol isomerase activity1.80E-04
10GO:0030742: GTP-dependent protein binding1.80E-04
11GO:0080115: myosin XI tail binding1.80E-04
12GO:0047750: cholestenol delta-isomerase activity1.80E-04
13GO:0016780: phosphotransferase activity, for other substituted phosphate groups7.46E-04
14GO:0070628: proteasome binding7.46E-04
15GO:0005375: copper ion transmembrane transporter activity1.11E-03
16GO:0043130: ubiquitin binding2.83E-03
17GO:0003684: damaged DNA binding4.53E-03
18GO:0008017: microtubule binding6.54E-03
19GO:0019829: cation-transporting ATPase activity9.39E-03
20GO:0005200: structural constituent of cytoskeleton1.02E-02
21GO:0042802: identical protein binding1.64E-02
22GO:0008236: serine-type peptidase activity1.94E-02
23GO:0008026: ATP-dependent helicase activity3.07E-02
24GO:0003777: microtubule motor activity3.44E-02
25GO:0003924: GTPase activity3.83E-02
26GO:0004721: phosphoprotein phosphatase activity3.96E-02
RankGO TermAdjusted P value
1GO:0010005: cortical microtubule, transverse to long axis3.92E-05
2GO:0030896: checkpoint clamp complex1.80E-04
3GO:0055028: cortical microtubule7.46E-04
4GO:0009574: preprophase band1.92E-03
5GO:0005874: microtubule9.94E-03
6GO:0005819: spindle1.18E-02
7GO:0043234: protein complex1.27E-02
8GO:0005794: Golgi apparatus1.31E-02
9GO:0009524: phragmoplast1.84E-02
10GO:0005576: extracellular region3.02E-02
11GO:0005856: cytoskeleton3.07E-02
12GO:0005871: kinesin complex3.32E-02
13GO:0009505: plant-type cell wall3.35E-02
14GO:0005783: endoplasmic reticulum3.90E-02