co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G045808

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0043987: histone H3-S10 phosphorylation	0.00E+00
3	GO:0018022: peptidyl-lysine methylation	0.00E+00
4	GO:0031508: pericentric heterochromatin assembly	0.00E+00
5	GO:0006268: DNA unwinding involved in DNA replication	0.00E+00
6	GO:0032465: regulation of cytokinesis	0.00E+00
7	GO:0010425: DNA methylation on cytosine within a CNG sequence	0.00E+00
8	GO:0032776: DNA methylation on cytosine	0.00E+00
9	GO:0006260: DNA replication	4.37E-14
10	GO:0007049: cell cycle	5.03E-13
11	GO:0016572: histone phosphorylation	1.50E-09
12	GO:0051567: histone H3-K9 methylation	1.03E-08
13	GO:0032508: DNA duplex unwinding	1.98E-08
14	GO:0051301: cell division	3.90E-08
15	GO:0006270: DNA replication initiation	4.61E-08
16	GO:0007018: microtubule-based movement	5.77E-08
17	GO:0006342: chromatin silencing	1.82E-07
18	GO:0006306: DNA methylation	4.66E-07
19	GO:0006275: regulation of DNA replication	1.25E-06
20	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.33E-06
21	GO:0051726: regulation of cell cycle	3.67E-06
22	GO:0010069: zygote asymmetric cytokinesis in embryo sac	7.96E-06
23	GO:0045814: negative regulation of gene expression, epigenetic	7.96E-06
24	GO:0008283: cell proliferation	1.86E-05
25	GO:0006259: DNA metabolic process	3.03E-05
26	GO:0000226: microtubule cytoskeleton organization	3.89E-05
27	GO:0090116: C-5 methylation of cytosine	6.45E-05
28	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.37E-05
29	GO:0009909: regulation of flower development	9.86E-05
30	GO:0000911: cytokinesis by cell plate formation	1.10E-04
31	GO:0006265: DNA topological change	1.16E-04
32	GO:0009966: regulation of signal transduction	1.74E-04
33	GO:0006084: acetyl-CoA metabolic process	2.72E-04
34	GO:0007059: chromosome segregation	4.74E-04
35	GO:0042276: error-prone translesion synthesis	4.74E-04
36	GO:1990426: mitotic recombination-dependent replication fork processing	4.74E-04
37	GO:0009652: thigmotropism	4.74E-04
38	GO:0009971: anastral spindle assembly involved in male meiosis	4.74E-04
39	GO:0010216: maintenance of DNA methylation	4.74E-04
40	GO:0048453: sepal formation	7.77E-04
41	GO:0051225: spindle assembly	9.49E-04
42	GO:0048451: petal formation	9.49E-04
43	GO:0009956: radial pattern formation	1.10E-03
44	GO:0009186: deoxyribonucleoside diphosphate metabolic process	1.10E-03
45	GO:0009755: hormone-mediated signaling pathway	1.10E-03
46	GO:0016571: histone methylation	1.14E-03
47	GO:0010332: response to gamma radiation	1.14E-03
48	GO:0009294: DNA mediated transformation	1.56E-03
49	GO:0009957: epidermal cell fate specification	1.85E-03
50	GO:0022904: respiratory electron transport chain	1.85E-03
51	GO:0001558: regulation of cell growth	1.85E-03
52	GO:0006281: DNA repair	2.04E-03
53	GO:0008356: asymmetric cell division	2.67E-03
54	GO:0032147: activation of protein kinase activity	2.67E-03
55	GO:0010082: regulation of root meristem growth	3.65E-03
56	GO:0060236: regulation of mitotic spindle organization	3.65E-03
57	GO:0032875: regulation of DNA endoreduplication	3.65E-03
58	GO:0007267: cell-cell signaling	4.73E-03
59	GO:0010087: phloem or xylem histogenesis	4.73E-03
60	GO:0010583: response to cyclopentenone	5.88E-03
61	GO:0006325: chromatin organization	5.88E-03
62	GO:0055072: iron ion homeostasis	5.88E-03
63	GO:0009934: regulation of meristem structural organization	5.88E-03
64	GO:0048366: leaf development	6.56E-03
65	GO:0048449: floral organ formation	7.14E-03
66	GO:0010074: maintenance of meristem identity	7.14E-03
67	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.47E-03
68	GO:0006302: double-strand break repair	8.47E-03
69	GO:0061025: membrane fusion	8.47E-03
70	GO:0009955: adaxial/abaxial pattern specification	9.90E-03
71	GO:0042127: regulation of cell proliferation	9.90E-03
72	GO:0009958: positive gravitropism	1.14E-02
73	GO:0016570: histone modification	1.14E-02
74	GO:0010048: vernalization response	1.14E-02
75	GO:0006284: base-excision repair	1.14E-02
76	GO:0012501: programmed cell death	1.14E-02
77	GO:0009616: virus induced gene silencing	1.14E-02
78	GO:0006974: cellular response to DNA damage stimulus	1.30E-02
79	GO:0019915: lipid storage	1.30E-02
80	GO:0010228: vegetative to reproductive phase transition of meristem	1.41E-02
81	GO:0009165: nucleotide biosynthetic process	1.46E-02
82	GO:0007034: vacuolar transport	1.46E-02
83	GO:0048316: seed development	1.63E-02
84	GO:0006406: mRNA export from nucleus	1.63E-02
85	GO:0010162: seed dormancy process	1.81E-02
86	GO:0050826: response to freezing	2.00E-02
87	GO:0007062: sister chromatid cohesion	2.00E-02
88	GO:0034968: histone lysine methylation	2.19E-02
89	GO:0016126: sterol biosynthetic process	2.19E-02
90	GO:0000724: double-strand break repair via homologous recombination	2.19E-02
91	GO:0006396: RNA processing	2.28E-02
92	GO:0006310: DNA recombination	2.39E-02
93	GO:0035196: production of miRNAs involved in gene silencing by miRNA	2.39E-02
94	GO:0010267: production of ta-siRNAs involved in RNA interference	2.39E-02
95	GO:0010182: sugar mediated signaling pathway	2.81E-02
96	GO:0000278: mitotic cell cycle	3.03E-02
97	GO:0009553: embryo sac development	3.03E-02
98	GO:0009845: seed germination	3.48E-02
99	GO:0031047: gene silencing by RNA	3.72E-02
100	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	3.72E-02
101	GO:0009933: meristem structural organization	3.96E-02
102	GO:0016579: protein deubiquitination	4.72E-02
103	GO:0009086: methionine biosynthetic process	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0008327: methyl-CpG binding	0.00E+00
2	GO:0008409: 5'-3' exonuclease activity	0.00E+00
3	GO:0046974: histone methyltransferase activity (H3-K9 specific)	0.00E+00
4	GO:0010428: methyl-CpNpG binding	0.00E+00
5	GO:0035175: histone kinase activity (H3-S10 specific)	0.00E+00
6	GO:0010429: methyl-CpNpN binding	0.00E+00
7	GO:0003678: DNA helicase activity	6.33E-09
8	GO:0003777: microtubule motor activity	5.77E-08
9	GO:0008017: microtubule binding	3.63E-07
10	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	7.96E-06
11	GO:0010385: double-stranded methylated DNA binding	2.85E-05
12	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	2.85E-05
13	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	6.45E-05
14	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	6.45E-05
15	GO:0019901: protein kinase binding	1.17E-04
16	GO:0005524: ATP binding	2.57E-04
17	GO:0030337: DNA polymerase processivity factor activity	4.74E-04
18	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.74E-04
19	GO:0017108: 5'-flap endonuclease activity	4.74E-04
20	GO:0000150: recombinase activity	4.74E-04
21	GO:0003916: DNA topoisomerase activity	4.74E-04
22	GO:0003677: DNA binding	9.36E-04
23	GO:0003688: DNA replication origin binding	1.10E-03
24	GO:0042393: histone binding	3.57E-03
25	GO:0003713: transcription coactivator activity	4.73E-03
26	GO:0008094: DNA-dependent ATPase activity	7.14E-03
27	GO:0000166: nucleotide binding	8.41E-03
28	GO:0046914: transition metal ion binding	1.14E-02
29	GO:0004518: nuclease activity	1.14E-02
30	GO:0005484: SNAP receptor activity	1.14E-02
31	GO:0003684: damaged DNA binding	1.14E-02
32	GO:0003697: single-stranded DNA binding	1.30E-02
33	GO:0003690: double-stranded DNA binding	1.30E-02
34	GO:0018024: histone-lysine N-methyltransferase activity	1.30E-02
35	GO:0004519: endonuclease activity	1.46E-02
36	GO:0003682: chromatin binding	1.76E-02
37	GO:0004527: exonuclease activity	1.81E-02
38	GO:0016651: oxidoreductase activity, acting on NAD(P)H	2.00E-02
39	GO:0008168: methyltransferase activity	4.49E-02
40	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.72E-02
41	GO:0045735: nutrient reservoir activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0033095: aleurone grain	0.00E+00
3	GO:0042555: MCM complex	1.50E-09
4	GO:0005871: kinesin complex	4.76E-08
5	GO:0005874: microtubule	9.16E-08
6	GO:0005819: spindle	4.30E-07
7	GO:0005875: microtubule associated complex	3.67E-06
8	GO:0005634: nucleus	1.59E-05
9	GO:0005971: ribonucleoside-diphosphate reductase complex	2.85E-05
10	GO:0005876: spindle microtubule	6.45E-05
11	GO:0010369: chromocenter	4.74E-04
12	GO:0043626: PCNA complex	4.74E-04
13	GO:0000815: ESCRT III complex	4.74E-04
14	GO:0000347: THO complex	4.74E-04
15	GO:0009524: phragmoplast	6.99E-04
16	GO:0000775: chromosome, centromeric region	1.85E-03
17	GO:0005815: microtubule organizing center	1.85E-03
18	GO:0005694: chromosome	2.66E-03
19	GO:0010005: cortical microtubule, transverse to long axis	4.73E-03
20	GO:0009574: preprophase band	4.73E-03
21	GO:0012505: endomembrane system	5.88E-03
22	GO:0016272: prefoldin complex	7.14E-03
23	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.14E-03
24	GO:0016604: nuclear body	7.14E-03
25	GO:0005743: mitochondrial inner membrane	1.57E-02
26	GO:0009504: cell plate	2.19E-02
27	GO:0005654: nucleoplasm	2.39E-02
28	GO:0031966: mitochondrial membrane	2.39E-02
29	GO:0019013: viral nucleocapsid	2.81E-02
30	GO:0005635: nuclear envelope	3.48E-02
31	GO:0005730: nucleolus	4.38E-02