Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G042754

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009143: nucleoside triphosphate catabolic process0.00E+00
2GO:0009204: deoxyribonucleoside triphosphate catabolic process0.00E+00
3GO:0006268: DNA unwinding involved in DNA replication0.00E+00
4GO:0051726: regulation of cell cycle1.91E-11
5GO:0008283: cell proliferation2.16E-10
6GO:0007049: cell cycle4.44E-08
7GO:0006270: DNA replication initiation1.93E-06
8GO:0006260: DNA replication3.37E-06
9GO:0000911: cytokinesis by cell plate formation6.12E-06
10GO:0051567: histone H3-K9 methylation7.03E-06
11GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity9.14E-06
12GO:0006306: DNA methylation9.22E-06
13GO:0006084: acetyl-CoA metabolic process5.30E-05
14GO:0016246: RNA interference5.30E-05
15GO:0006275: regulation of DNA replication6.05E-05
16GO:0016572: histone phosphorylation1.02E-04
17GO:1990426: mitotic recombination-dependent replication fork processing1.67E-04
18GO:0006259: DNA metabolic process1.69E-04
19GO:0010332: response to gamma radiation2.56E-04
20GO:0032508: DNA duplex unwinding2.56E-04
21GO:0051301: cell division2.91E-04
22GO:0009186: deoxyribonucleoside diphosphate metabolic process4.07E-04
23GO:0043987: histone H3-S10 phosphorylation4.07E-04
24GO:0044036: cell wall macromolecule metabolic process6.97E-04
25GO:0001558: regulation of cell growth6.97E-04
26GO:0006346: methylation-dependent chromatin silencing7.76E-04
27GO:0009117: nucleotide metabolic process1.04E-03
28GO:0000226: microtubule cytoskeleton organization1.26E-03
29GO:0006265: DNA topological change1.40E-03
30GO:0010082: regulation of root meristem growth1.40E-03
31GO:0006334: nucleosome assembly1.61E-03
32GO:0010583: response to cyclopentenone2.21E-03
33GO:0001708: cell fate specification2.21E-03
34GO:0010089: xylem development2.21E-03
35GO:0006302: double-strand break repair3.15E-03
36GO:0061025: membrane fusion3.15E-03
37GO:0042127: regulation of cell proliferation3.68E-03
38GO:0048453: sepal formation4.24E-03
39GO:0012501: programmed cell death4.24E-03
40GO:0051225: spindle assembly4.81E-03
41GO:0048451: petal formation4.81E-03
42GO:0009165: nucleotide biosynthetic process5.40E-03
43GO:0007034: vacuolar transport5.40E-03
44GO:0031048: chromatin silencing by small RNA6.03E-03
45GO:0016126: sterol biosynthetic process8.06E-03
46GO:0000724: double-strand break repair via homologous recombination8.06E-03
47GO:0009966: regulation of signal transduction8.79E-03
48GO:0051258: protein polymerization1.11E-02
49GO:0007017: microtubule-based process1.27E-02
50GO:0009790: embryo development1.91E-02
51GO:0016311: dephosphorylation2.53E-02
52GO:0007018: microtubule-based movement3.22E-02
53GO:0048364: root development3.46E-02
54GO:0007275: multicellular organism development3.58E-02
55GO:0009909: regulation of flower development4.89E-02
RankGO TermAdjusted P value
1GO:0047429: nucleoside-triphosphate diphosphatase activity0.00E+00
2GO:0019901: protein kinase binding1.17E-05
3GO:0000150: recombinase activity1.67E-04
4GO:0003678: DNA helicase activity1.69E-04
5GO:0003688: DNA replication origin binding4.07E-04
6GO:0035175: histone kinase activity (H3-S10 specific)4.07E-04
7GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor6.97E-04
8GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.04E-03
9GO:0046982: protein heterodimerization activity2.55E-03
10GO:0008094: DNA-dependent ATPase activity2.66E-03
11GO:0046914: transition metal ion binding4.24E-03
12GO:0005484: SNAP receptor activity4.24E-03
13GO:0003684: damaged DNA binding4.24E-03
14GO:0003677: DNA binding4.79E-03
15GO:0003697: single-stranded DNA binding4.81E-03
16GO:0003690: double-stranded DNA binding4.81E-03
17GO:0005200: structural constituent of cytoskeleton9.54E-03
18GO:0045735: nutrient reservoir activity1.81E-02
19GO:0017111: nucleoside-triphosphatase activity2.11E-02
20GO:0016791: phosphatase activity2.42E-02
21GO:0003777: microtubule motor activity3.22E-02
22GO:0016881: acid-amino acid ligase activity3.70E-02
23GO:0008017: microtubule binding4.62E-02
RankGO TermAdjusted P value
1GO:0033095: aleurone grain0.00E+00
2GO:0042555: MCM complex1.02E-04
3GO:0000815: ESCRT III complex1.67E-04
4GO:0000347: THO complex1.67E-04
5GO:0005694: chromosome2.63E-04
6GO:0005971: ribonucleoside-diphosphate reductase complex6.97E-04
7GO:0000808: origin recognition complex6.97E-04
8GO:0000786: nucleosome1.36E-03
9GO:0012505: endomembrane system2.21E-03
10GO:0005634: nucleus5.52E-03
11GO:0009504: cell plate8.06E-03
12GO:0005874: microtubule9.02E-03
13GO:0005819: spindle1.11E-02
14GO:0043234: protein complex1.19E-02
15GO:0009524: phragmoplast1.72E-02
16GO:0005875: microtubule associated complex1.91E-02
17GO:0005871: kinesin complex3.10E-02
18GO:0009506: plasmodesma4.76E-02