Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G042080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048564: photosystem I assembly0.00E+00
2GO:0043686: co-translational protein modification0.00E+00
3GO:0006591: ornithine metabolic process0.00E+00
4GO:0009306: protein secretion4.18E-06
5GO:0009959: negative gravitropism4.59E-05
6GO:0030308: negative regulation of cell growth1.19E-04
7GO:0006520: cellular amino acid metabolic process1.97E-04
8GO:0019760: glucosinolate metabolic process2.13E-04
9GO:0051085: chaperone mediated protein folding requiring cofactor2.13E-04
10GO:0016075: rRNA catabolic process2.13E-04
11GO:0042026: protein refolding3.22E-04
12GO:0006782: protoporphyrinogen IX biosynthetic process3.22E-04
13GO:0009658: chloroplast organization4.38E-04
14GO:0010027: thylakoid membrane organization1.22E-03
15GO:0009416: response to light stimulus1.22E-03
16GO:0016556: mRNA modification1.38E-03
17GO:0006779: porphyrin-containing compound biosynthetic process1.57E-03
18GO:0009630: gravitropism2.34E-03
19GO:0019684: photosynthesis, light reaction2.55E-03
20GO:0006364: rRNA processing2.73E-03
21GO:0044267: cellular protein metabolic process2.77E-03
22GO:0008219: cell death2.77E-03
23GO:0009627: systemic acquired resistance3.00E-03
24GO:0010103: stomatal complex morphogenesis3.00E-03
25GO:0009735: response to cytokinin5.09E-03
26GO:0009637: response to blue light5.67E-03
27GO:0009790: embryo development5.98E-03
28GO:0010114: response to red light6.27E-03
29GO:0006457: protein folding6.87E-03
30GO:0010218: response to far red light6.90E-03
31GO:0009723: response to ethylene7.88E-03
32GO:0015031: protein transport8.90E-03
33GO:0015995: chlorophyll biosynthetic process9.25E-03
34GO:0010207: photosystem II assembly1.18E-02
35GO:0006396: RNA processing1.34E-02
36GO:0019252: starch biosynthetic process1.55E-02
37GO:0006098: pentose-phosphate shunt1.82E-02
38GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.82E-02
39GO:0015979: photosynthesis1.96E-02
40GO:0006184: obsolete GTP catabolic process2.20E-02
41GO:0006950: response to stress3.42E-02
42GO:0009793: embryo development ending in seed dormancy4.02E-02
RankGO TermAdjusted P value
1GO:0042586: peptide deformylase activity0.00E+00
2GO:0004585: ornithine carbamoyltransferase activity0.00E+00
3GO:0016743: carboxyl- or carbamoyltransferase activity5.19E-07
4GO:0005471: ATP:ADP antiporter activity4.59E-05
5GO:0004853: uroporphyrinogen decarboxylase activity1.19E-04
6GO:0005496: steroid binding1.19E-04
7GO:0008565: protein transporter activity1.27E-04
8GO:0016597: amino acid binding1.78E-04
9GO:0016817: hydrolase activity, acting on acid anhydrides5.76E-04
10GO:0004525: ribonuclease III activity7.18E-04
11GO:0016831: carboxy-lyase activity2.34E-03
12GO:0004222: metalloendopeptidase activity4.01E-03
13GO:0020037: heme binding1.35E-02
14GO:0005525: GTP binding1.38E-02
15GO:0051082: unfolded protein binding2.05E-02
16GO:0004601: peroxidase activity2.45E-02
17GO:0000287: magnesium ion binding2.70E-02
18GO:0016829: lyase activity2.97E-02
19GO:0003924: GTPase activity4.98E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast7.06E-07
2GO:0009535: chloroplast thylakoid membrane1.08E-06
3GO:0009941: chloroplast envelope2.65E-05
4GO:0009570: chloroplast stroma2.87E-04
5GO:0031977: thylakoid lumen3.55E-04
6GO:0019898: extrinsic component of membrane5.76E-04
7GO:0009654: photosystem II oxygen evolving complex7.18E-04
8GO:0009543: chloroplast thylakoid lumen1.94E-03
9GO:0009706: chloroplast inner membrane4.01E-03
10GO:0009523: photosystem II5.09E-03
11GO:0010319: stromule6.27E-03
12GO:0009579: thylakoid7.25E-03
13GO:0009534: chloroplast thylakoid9.25E-03
14GO:0009505: plant-type cell wall4.52E-02