co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G042080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048564: photosystem I assembly	0.00E+00
2	GO:0043686: co-translational protein modification	0.00E+00
3	GO:0006591: ornithine metabolic process	0.00E+00
4	GO:0009306: protein secretion	4.18E-06
5	GO:0009959: negative gravitropism	4.59E-05
6	GO:0030308: negative regulation of cell growth	1.19E-04
7	GO:0006520: cellular amino acid metabolic process	1.97E-04
8	GO:0019760: glucosinolate metabolic process	2.13E-04
9	GO:0051085: chaperone mediated protein folding requiring cofactor	2.13E-04
10	GO:0016075: rRNA catabolic process	2.13E-04
11	GO:0042026: protein refolding	3.22E-04
12	GO:0006782: protoporphyrinogen IX biosynthetic process	3.22E-04
13	GO:0009658: chloroplast organization	4.38E-04
14	GO:0010027: thylakoid membrane organization	1.22E-03
15	GO:0009416: response to light stimulus	1.22E-03
16	GO:0016556: mRNA modification	1.38E-03
17	GO:0006779: porphyrin-containing compound biosynthetic process	1.57E-03
18	GO:0009630: gravitropism	2.34E-03
19	GO:0019684: photosynthesis, light reaction	2.55E-03
20	GO:0006364: rRNA processing	2.73E-03
21	GO:0044267: cellular protein metabolic process	2.77E-03
22	GO:0008219: cell death	2.77E-03
23	GO:0009627: systemic acquired resistance	3.00E-03
24	GO:0010103: stomatal complex morphogenesis	3.00E-03
25	GO:0009735: response to cytokinin	5.09E-03
26	GO:0009637: response to blue light	5.67E-03
27	GO:0009790: embryo development	5.98E-03
28	GO:0010114: response to red light	6.27E-03
29	GO:0006457: protein folding	6.87E-03
30	GO:0010218: response to far red light	6.90E-03
31	GO:0009723: response to ethylene	7.88E-03
32	GO:0015031: protein transport	8.90E-03
33	GO:0015995: chlorophyll biosynthetic process	9.25E-03
34	GO:0010207: photosystem II assembly	1.18E-02
35	GO:0006396: RNA processing	1.34E-02
36	GO:0019252: starch biosynthetic process	1.55E-02
37	GO:0006098: pentose-phosphate shunt	1.82E-02
38	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.82E-02
39	GO:0015979: photosynthesis	1.96E-02
40	GO:0006184: obsolete GTP catabolic process	2.20E-02
41	GO:0006950: response to stress	3.42E-02
42	GO:0009793: embryo development ending in seed dormancy	4.02E-02

Rank	GO Term	Adjusted P value
1	GO:0042586: peptide deformylase activity	0.00E+00
2	GO:0004585: ornithine carbamoyltransferase activity	0.00E+00
3	GO:0016743: carboxyl- or carbamoyltransferase activity	5.19E-07
4	GO:0005471: ATP:ADP antiporter activity	4.59E-05
5	GO:0004853: uroporphyrinogen decarboxylase activity	1.19E-04
6	GO:0005496: steroid binding	1.19E-04
7	GO:0008565: protein transporter activity	1.27E-04
8	GO:0016597: amino acid binding	1.78E-04
9	GO:0016817: hydrolase activity, acting on acid anhydrides	5.76E-04
10	GO:0004525: ribonuclease III activity	7.18E-04
11	GO:0016831: carboxy-lyase activity	2.34E-03
12	GO:0004222: metalloendopeptidase activity	4.01E-03
13	GO:0020037: heme binding	1.35E-02
14	GO:0005525: GTP binding	1.38E-02
15	GO:0051082: unfolded protein binding	2.05E-02
16	GO:0004601: peroxidase activity	2.45E-02
17	GO:0000287: magnesium ion binding	2.70E-02
18	GO:0016829: lyase activity	2.97E-02
19	GO:0003924: GTPase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	7.06E-07
2	GO:0009535: chloroplast thylakoid membrane	1.08E-06
3	GO:0009941: chloroplast envelope	2.65E-05
4	GO:0009570: chloroplast stroma	2.87E-04
5	GO:0031977: thylakoid lumen	3.55E-04
6	GO:0019898: extrinsic component of membrane	5.76E-04
7	GO:0009654: photosystem II oxygen evolving complex	7.18E-04
8	GO:0009543: chloroplast thylakoid lumen	1.94E-03
9	GO:0009706: chloroplast inner membrane	4.01E-03
10	GO:0009523: photosystem II	5.09E-03
11	GO:0010319: stromule	6.27E-03
12	GO:0009579: thylakoid	7.25E-03
13	GO:0009534: chloroplast thylakoid	9.25E-03
14	GO:0009505: plant-type cell wall	4.52E-02