co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G033208

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010028: xanthophyll cycle	0.00E+00
2	GO:0035436: triose phosphate transmembrane transport	0.00E+00
3	GO:0015714: phosphoenolpyruvate transport	0.00E+00
4	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
5	GO:0071486: cellular response to high light intensity	0.00E+00
6	GO:0051188: cofactor biosynthetic process	0.00E+00
7	GO:0089722: phosphoenolpyruvate transmembrane transport	0.00E+00
8	GO:0042550: photosystem I stabilization	0.00E+00
9	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	0.00E+00
10	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
11	GO:0015979: photosynthesis	1.16E-14
12	GO:0010207: photosystem II assembly	8.29E-11
13	GO:0006098: pentose-phosphate shunt	9.14E-11
14	GO:0015995: chlorophyll biosynthetic process	3.95E-10
15	GO:0016117: carotenoid biosynthetic process	5.08E-10
16	GO:0009773: photosynthetic electron transport in photosystem I	7.05E-10
17	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.37E-08
18	GO:0009767: photosynthetic electron transport chain	1.31E-07
19	GO:0009902: chloroplast relocation	1.74E-07
20	GO:0010027: thylakoid membrane organization	1.86E-07
21	GO:0006364: rRNA processing	3.89E-07
22	GO:0009637: response to blue light	5.02E-07
23	GO:0010114: response to red light	8.02E-07
24	GO:0010218: response to far red light	1.24E-06
25	GO:0070838: divalent metal ion transport	2.92E-06
26	GO:0043085: positive regulation of catalytic activity	7.35E-06
27	GO:0030003: cellular cation homeostasis	1.23E-05
28	GO:0010155: regulation of proton transport	2.03E-05
29	GO:0000023: maltose metabolic process	2.72E-05
30	GO:0015977: carbon fixation	3.31E-05
31	GO:0009416: response to light stimulus	3.48E-05
32	GO:0019252: starch biosynthetic process	3.89E-05
33	GO:0022900: electron transport chain	8.23E-05
34	GO:0042793: transcription from plastid promoter	1.62E-04
35	GO:0019761: glucosinolate biosynthetic process	1.94E-04
36	GO:0000096: sulfur amino acid metabolic process	2.11E-04
37	GO:0010103: stomatal complex morphogenesis	4.38E-04
38	GO:0006766: vitamin metabolic process	4.75E-04
39	GO:0009108: coenzyme biosynthetic process	4.75E-04
40	GO:0010206: photosystem II repair	4.75E-04
41	GO:0034660: ncRNA metabolic process	4.75E-04
42	GO:0009106: lipoate metabolic process	4.75E-04
43	GO:0046777: protein autophosphorylation	5.12E-04
44	GO:0080167: response to karrikin	5.86E-04
45	GO:0019253: reductive pentose-phosphate cycle	6.82E-04
46	GO:0019676: ammonia assimilation cycle	6.82E-04
47	GO:0009072: aromatic amino acid family metabolic process	8.44E-04
48	GO:0016556: mRNA modification	1.33E-03
49	GO:0006814: sodium ion transport	1.33E-03
50	GO:0006875: cellular metal ion homeostasis	1.58E-03
51	GO:0010236: plastoquinone biosynthetic process	1.58E-03
52	GO:0044272: sulfur compound biosynthetic process	1.58E-03
53	GO:0006546: glycine catabolic process	1.61E-03
54	GO:0009409: response to cold	1.98E-03
55	GO:0006636: unsaturated fatty acid biosynthetic process	2.58E-03
56	GO:0022904: respiratory electron transport chain	2.60E-03
57	GO:0051289: protein homotetramerization	2.60E-03
58	GO:0019760: glucosinolate metabolic process	2.60E-03
59	GO:0016024: CDP-diacylglycerol biosynthetic process	2.60E-03
60	GO:0034599: cellular response to oxidative stress	2.60E-03
61	GO:0019684: photosynthesis, light reaction	3.41E-03
62	GO:0009657: plastid organization	3.41E-03
63	GO:0050821: protein stabilization	3.85E-03
64	GO:0016485: protein processing	3.85E-03
65	GO:0019216: regulation of lipid metabolic process	3.85E-03
66	GO:0051260: protein homooligomerization	3.85E-03
67	GO:0009595: detection of biotic stimulus	3.85E-03
68	GO:0045037: protein import into chloroplast stroma	3.85E-03
69	GO:0009966: regulation of signal transduction	3.87E-03
70	GO:0009644: response to high light intensity	4.12E-03
71	GO:0007568: aging	5.24E-03
72	GO:0015994: chlorophyll metabolic process	5.24E-03
73	GO:0010189: vitamin E biosynthetic process	5.24E-03
74	GO:0006796: phosphate-containing compound metabolic process	5.24E-03
75	GO:0009088: threonine biosynthetic process	5.24E-03
76	GO:0009772: photosynthetic electron transport in photosystem II	5.24E-03
77	GO:0050790: regulation of catalytic activity	5.24E-03
78	GO:0009813: flavonoid biosynthetic process	5.24E-03
79	GO:0043900: regulation of multi-organism process	5.24E-03
80	GO:0034755: iron ion transmembrane transport	5.24E-03
81	GO:0019748: secondary metabolic process	5.24E-03
82	GO:0015986: ATP synthesis coupled proton transport	5.44E-03
83	GO:0009695: jasmonic acid biosynthetic process	5.44E-03
84	GO:0006568: tryptophan metabolic process	6.79E-03
85	GO:0006542: glutamine biosynthetic process	6.79E-03
86	GO:0009853: photorespiration	7.32E-03
87	GO:0000413: protein peptidyl-prolyl isomerization	8.00E-03
88	GO:0009411: response to UV	8.47E-03
89	GO:0006801: superoxide metabolic process	8.47E-03
90	GO:0055114: oxidation-reduction process	1.02E-02
91	GO:0010310: regulation of hydrogen peroxide metabolic process	1.03E-02
92	GO:0005985: sucrose metabolic process	1.03E-02
93	GO:0019344: cysteine biosynthetic process	1.11E-02
94	GO:0000162: tryptophan biosynthetic process	1.22E-02
95	GO:0009407: toxin catabolic process	1.43E-02
96	GO:0006006: glucose metabolic process	1.65E-02
97	GO:0009697: salicylic acid biosynthetic process	1.65E-02
98	GO:0006354: DNA-templated transcription, elongation	1.65E-02
99	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.88E-02
100	GO:0009765: photosynthesis, light harvesting	1.88E-02
101	GO:0009744: response to sucrose	1.90E-02
102	GO:0046854: phosphatidylinositol phosphorylation	2.12E-02
103	GO:0045036: protein targeting to chloroplast	2.12E-02
104	GO:0009624: response to nematode	2.26E-02
105	GO:0006096: glycolytic process	2.26E-02
106	GO:0008652: cellular amino acid biosynthetic process	2.26E-02
107	GO:0006108: malate metabolic process	2.37E-02
108	GO:0006655: phosphatidylglycerol biosynthetic process	2.37E-02
109	GO:0031408: oxylipin biosynthetic process	2.37E-02
110	GO:0007030: Golgi organization	2.63E-02
111	GO:0006833: water transport	2.90E-02
112	GO:0006972: hyperosmotic response	2.90E-02
113	GO:0009750: response to fructose	2.90E-02
114	GO:0006631: fatty acid metabolic process	3.18E-02
115	GO:0030154: cell differentiation	3.18E-02
116	GO:0009749: response to glucose	3.18E-02
117	GO:0006412: translation	3.43E-02
118	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.47E-02
119	GO:0018298: protein-chromophore linkage	3.47E-02
120	GO:0006612: protein targeting to membrane	3.77E-02
121	GO:0010200: response to chitin	3.77E-02
122	GO:0010363: regulation of plant-type hypersensitive response	4.08E-02
123	GO:0006807: nitrogen compound metabolic process	4.08E-02
124	GO:0010224: response to UV-B	4.08E-02
125	GO:0035304: regulation of protein dephosphorylation	4.08E-02
126	GO:0009867: jasmonic acid mediated signaling pathway	4.40E-02
127	GO:0009817: defense response to fungus, incompatible interaction	4.40E-02
128	GO:0031348: negative regulation of defense response	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0009670: triose-phosphate:phosphate antiporter activity	0.00E+00
2	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
3	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	0.00E+00
4	GO:0045550: geranylgeranyl reductase activity	0.00E+00
5	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
6	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
7	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
8	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
9	GO:0031679: NADH dehydrogenase (plastoquinone) activity	0.00E+00
10	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
11	GO:0016984: ribulose-bisphosphate carboxylase activity	1.02E-06
12	GO:0009055: electron carrier activity	6.95E-06
13	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	1.54E-05
14	GO:0051537: 2 iron, 2 sulfur cluster binding	4.19E-05
15	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.94E-05
16	GO:0016168: chlorophyll binding	3.70E-04
17	GO:0004618: phosphoglycerate kinase activity	6.82E-04
18	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	6.82E-04
19	GO:0015088: copper uptake transmembrane transporter activity	6.82E-04
20	GO:0004795: threonine synthase activity	6.82E-04
21	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	6.82E-04
22	GO:0051536: iron-sulfur cluster binding	1.51E-03
23	GO:0045430: chalcone isomerase activity	1.58E-03
24	GO:0004605: phosphatidate cytidylyltransferase activity	1.58E-03
25	GO:0051920: peroxiredoxin activity	1.58E-03
26	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.58E-03
27	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.61E-03
28	GO:0033897: ribonuclease T2 activity	2.60E-03
29	GO:0016872: intramolecular lyase activity	2.60E-03
30	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	2.60E-03
31	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.85E-03
32	GO:0016209: antioxidant activity	3.85E-03
33	GO:0071949: FAD binding	3.85E-03
34	GO:0004332: fructose-bisphosphate aldolase activity	3.85E-03
35	GO:0030234: enzyme regulator activity	5.24E-03
36	GO:0005381: iron ion transmembrane transporter activity	5.24E-03
37	GO:0004470: malic enzyme activity	5.24E-03
38	GO:0004834: tryptophan synthase activity	6.79E-03
39	GO:0004356: glutamate-ammonia ligase activity	6.79E-03
40	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	8.47E-03
41	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	8.47E-03
42	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	9.49E-03
43	GO:0004784: superoxide dismutase activity	1.03E-02
44	GO:0042578: phosphoric ester hydrolase activity	1.22E-02
45	GO:0004427: inorganic diphosphatase activity	1.22E-02
46	GO:0046914: transition metal ion binding	1.65E-02
47	GO:0043531: ADP binding	1.88E-02
48	GO:0003690: double-stranded DNA binding	1.88E-02
49	GO:0004497: monooxygenase activity	2.02E-02
50	GO:0016491: oxidoreductase activity	2.13E-02
51	GO:0003735: structural constituent of ribosome	2.25E-02
52	GO:0042803: protein homodimerization activity	2.65E-02
53	GO:0004713: protein tyrosine kinase activity	2.90E-02
54	GO:0008080: N-acetyltransferase activity	3.18E-02
55	GO:0016829: lyase activity	3.20E-02
56	GO:0015035: protein disulfide oxidoreductase activity	3.52E-02
57	GO:0051287: NAD binding	3.85E-02
58	GO:0005506: iron ion binding	4.48E-02
59	GO:0015078: hydrogen ion transmembrane transporter activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0009512: cytochrome b6f complex	0.00E+00
2	GO:0030093: chloroplast photosystem I	0.00E+00
3	GO:0009507: chloroplast	3.05E-29
4	GO:0009535: chloroplast thylakoid membrane	2.32E-23
5	GO:0009941: chloroplast envelope	1.25E-20
6	GO:0009579: thylakoid	9.99E-18
7	GO:0009570: chloroplast stroma	5.12E-13
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.21E-10
9	GO:0009543: chloroplast thylakoid lumen	2.07E-09
10	GO:0009534: chloroplast thylakoid	1.06E-08
11	GO:0031977: thylakoid lumen	3.99E-08
12	GO:0009522: photosystem I	1.25E-06
13	GO:0010287: plastoglobule	4.58E-06
14	GO:0009523: photosystem II	7.45E-06
15	GO:0048046: apoplast	3.98E-05
16	GO:0009508: plastid chromosome	2.11E-04
17	GO:0010319: stromule	2.21E-04
18	GO:0019898: extrinsic component of membrane	3.29E-04
19	GO:0009654: photosystem II oxygen evolving complex	4.75E-04
20	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	6.82E-04
21	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.82E-04
22	GO:0009533: chloroplast stromal thylakoid	1.58E-03
23	GO:0009295: nucleoid	1.61E-03
24	GO:0016020: membrane	1.94E-03
25	GO:0015935: small ribosomal subunit	2.04E-03
26	GO:0042651: thylakoid membrane	2.23E-03
27	GO:0009538: photosystem I reaction center	3.85E-03
28	GO:0005840: ribosome	1.51E-02
29	GO:0009536: plastid	3.82E-02
30	GO:0030529: intracellular ribonucleoprotein complex	4.18E-02