co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G030523

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006268: DNA unwinding involved in DNA replication	0.00E+00
2	GO:0032465: regulation of cytokinesis	0.00E+00
3	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
4	GO:0006233: dTDP biosynthetic process	0.00E+00
5	GO:0006260: DNA replication	2.61E-08
6	GO:0007049: cell cycle	2.01E-07
7	GO:0043987: histone H3-S10 phosphorylation	2.60E-06
8	GO:0016572: histone phosphorylation	3.18E-06
9	GO:0006084: acetyl-CoA metabolic process	1.02E-04
10	GO:0010425: DNA methylation on cytosine within a CNG sequence	2.54E-04
11	GO:0007059: chromosome segregation	2.54E-04
12	GO:1990426: mitotic recombination-dependent replication fork processing	2.54E-04
13	GO:0051726: regulation of cell cycle	2.61E-04
14	GO:0006259: DNA metabolic process	3.14E-04
15	GO:0010389: regulation of G2/M transition of mitotic cell cycle	4.65E-04
16	GO:0032508: DNA duplex unwinding	4.65E-04
17	GO:0006281: DNA repair	5.07E-04
18	GO:0018279: protein N-linked glycosylation via asparagine	6.03E-04
19	GO:0045814: negative regulation of gene expression, epigenetic	6.03E-04
20	GO:0010069: zygote asymmetric cytokinesis in embryo sac	6.03E-04
21	GO:0009956: radial pattern formation	6.03E-04
22	GO:0009186: deoxyribonucleoside diphosphate metabolic process	6.03E-04
23	GO:0009755: hormone-mediated signaling pathway	6.03E-04
24	GO:0051301: cell division	6.31E-04
25	GO:0007018: microtubule-based movement	7.30E-04
26	GO:0009966: regulation of signal transduction	9.74E-04
27	GO:0022904: respiratory electron transport chain	1.03E-03
28	GO:0090116: C-5 methylation of cytosine	1.51E-03
29	GO:0042176: regulation of protein catabolic process	1.51E-03
30	GO:0008356: asymmetric cell division	1.51E-03
31	GO:0009909: regulation of flower development	1.60E-03
32	GO:0006275: regulation of DNA replication	2.00E-03
33	GO:0006265: DNA topological change	2.03E-03
34	GO:0010082: regulation of root meristem growth	2.03E-03
35	GO:0006270: DNA replication initiation	2.17E-03
36	GO:0055072: iron ion homeostasis	3.22E-03
37	GO:0009934: regulation of meristem structural organization	3.22E-03
38	GO:0010583: response to cyclopentenone	3.22E-03
39	GO:0000911: cytokinesis by cell plate formation	3.66E-03
40	GO:0051567: histone H3-K9 methylation	3.91E-03
41	GO:0048449: floral organ formation	3.92E-03
42	GO:0010074: maintenance of meristem identity	3.92E-03
43	GO:0006306: DNA methylation	4.44E-03
44	GO:0061025: membrane fusion	4.65E-03
45	GO:0006342: chromatin silencing	4.65E-03
46	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.65E-03
47	GO:0006302: double-strand break repair	4.65E-03
48	GO:0042127: regulation of cell proliferation	5.40E-03
49	GO:0008283: cell proliferation	5.58E-03
50	GO:0012501: programmed cell death	6.22E-03
51	GO:0016570: histone modification	6.22E-03
52	GO:0010048: vernalization response	6.22E-03
53	GO:0006284: base-excision repair	6.22E-03
54	GO:0019915: lipid storage	7.07E-03
55	GO:0006974: cellular response to DNA damage stimulus	7.07E-03
56	GO:0051225: spindle assembly	7.07E-03
57	GO:0016571: histone methylation	7.96E-03
58	GO:0009165: nucleotide biosynthetic process	7.96E-03
59	GO:0010332: response to gamma radiation	7.96E-03
60	GO:0006487: protein N-linked glycosylation	8.90E-03
61	GO:0006406: mRNA export from nucleus	8.90E-03
62	GO:0009607: response to biotic stimulus	8.90E-03
63	GO:0006396: RNA processing	9.57E-03
64	GO:0009294: DNA mediated transformation	9.86E-03
65	GO:0010162: seed dormancy process	9.86E-03
66	GO:0006446: regulation of translational initiation	9.86E-03
67	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.86E-03
68	GO:0050826: response to freezing	1.09E-02
69	GO:0001731: formation of translation preinitiation complex	1.09E-02
70	GO:0016126: sterol biosynthetic process	1.19E-02
71	GO:0000724: double-strand break repair via homologous recombination	1.19E-02
72	GO:0006310: DNA recombination	1.30E-02
73	GO:0008219: cell death	1.30E-02
74	GO:0010182: sugar mediated signaling pathway	1.52E-02
75	GO:0000278: mitotic cell cycle	1.64E-02
76	GO:0009845: seed germination	1.88E-02
77	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.01E-02
78	GO:0009933: meristem structural organization	2.14E-02
79	GO:0000226: microtubule cytoskeleton organization	2.27E-02
80	GO:0006397: mRNA processing	2.55E-02
81	GO:0016579: protein deubiquitination	2.55E-02
82	GO:0048366: leaf development	2.69E-02
83	GO:0009086: methionine biosynthetic process	2.69E-02
84	GO:0009790: embryo development	2.83E-02
85	GO:0009640: photomorphogenesis	3.60E-02
86	GO:0009793: embryo development ending in seed dormancy	4.50E-02
87	GO:0010228: vegetative to reproductive phase transition of meristem	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0004798: thymidylate kinase activity	0.00E+00
2	GO:0008409: 5'-3' exonuclease activity	0.00E+00
3	GO:0035175: histone kinase activity (H3-S10 specific)	2.60E-06
4	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	9.60E-06
5	GO:0008017: microtubule binding	1.55E-04
6	GO:0017108: 5'-flap endonuclease activity	2.54E-04
7	GO:0000150: recombinase activity	2.54E-04
8	GO:0003916: DNA topoisomerase activity	2.54E-04
9	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.54E-04
10	GO:0003678: DNA helicase activity	3.14E-04
11	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	6.03E-04
12	GO:0003777: microtubule motor activity	7.30E-04
13	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	1.51E-03
14	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.51E-03
15	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.03E-03
16	GO:0030234: enzyme regulator activity	2.03E-03
17	GO:0043022: ribosome binding	3.92E-03
18	GO:0008094: DNA-dependent ATPase activity	3.92E-03
19	GO:0000166: nucleotide binding	5.23E-03
20	GO:0005484: SNAP receptor activity	6.22E-03
21	GO:0003684: damaged DNA binding	6.22E-03
22	GO:0046914: transition metal ion binding	6.22E-03
23	GO:0004518: nuclease activity	6.22E-03
24	GO:0003690: double-stranded DNA binding	7.07E-03
25	GO:0003697: single-stranded DNA binding	7.07E-03
26	GO:0004519: endonuclease activity	7.96E-03
27	GO:0005524: ATP binding	8.59E-03
28	GO:0004527: exonuclease activity	9.86E-03
29	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.09E-02
30	GO:0019901: protein kinase binding	1.09E-02
31	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.55E-02
32	GO:0005516: calmodulin binding	3.76E-02
33	GO:0003677: DNA binding	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005971: ribonucleoside-diphosphate reductase complex	9.60E-06
3	GO:0042555: MCM complex	1.93E-04
4	GO:0000347: THO complex	2.54E-04
5	GO:0005875: microtubule associated complex	2.61E-04
6	GO:0008250: oligosaccharyltransferase complex	6.03E-04
7	GO:0005871: kinesin complex	6.79E-04
8	GO:0005654: nucleoplasm	9.74E-04
9	GO:0000775: chromosome, centromeric region	1.03E-03
10	GO:0005819: spindle	1.37E-03
11	GO:0005874: microtubule	2.43E-03
12	GO:0012505: endomembrane system	3.22E-03
13	GO:0016272: prefoldin complex	3.92E-03
14	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.92E-03
15	GO:0016604: nuclear body	3.92E-03
16	GO:0005743: mitochondrial inner membrane	6.55E-03
17	GO:0005634: nucleus	7.55E-03
18	GO:0033290: eukaryotic 48S preinitiation complex	1.09E-02
19	GO:0016282: eukaryotic 43S preinitiation complex	1.09E-02
20	GO:0005852: eukaryotic translation initiation factor 3 complex	1.19E-02
21	GO:0009504: cell plate	1.19E-02
22	GO:0031966: mitochondrial membrane	1.30E-02
23	GO:0019013: viral nucleocapsid	1.52E-02
24	GO:0005635: nuclear envelope	1.88E-02
25	GO:0009524: phragmoplast	2.55E-02
26	GO:0045271: respiratory chain complex I	4.09E-02