Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G029506

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045038: protein import into chloroplast thylakoid membrane5.43E-05
2GO:0010207: photosystem II assembly5.94E-05
3GO:0006569: tryptophan catabolic process7.75E-05
4GO:0010027: thylakoid membrane organization8.92E-05
5GO:0006399: tRNA metabolic process1.63E-04
6GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.97E-04
7GO:0006364: rRNA processing2.28E-04
8GO:0009684: indoleacetic acid biosynthetic process2.32E-04
9GO:0016556: mRNA modification2.69E-04
10GO:0042793: transcription from plastid promoter3.90E-04
11GO:0035304: regulation of protein dephosphorylation6.67E-04
12GO:0009902: chloroplast relocation9.34E-04
13GO:0009073: aromatic amino acid family biosynthetic process1.11E-03
14GO:0019344: cysteine biosynthetic process1.17E-03
15GO:0019761: glucosinolate biosynthetic process1.23E-03
16GO:0016226: iron-sulfur cluster assembly1.35E-03
17GO:0048481: plant ovule development1.48E-03
18GO:0009658: chloroplast organization1.55E-03
19GO:0010228: vegetative to reproductive phase transition of meristem1.94E-03
20GO:0006200: obsolete ATP catabolic process2.08E-03
21GO:0045893: positive regulation of transcription, DNA-templated2.58E-03
22GO:0006098: pentose-phosphate shunt3.58E-03
23GO:0006184: obsolete GTP catabolic process4.31E-03
24GO:0009793: embryo development ending in seed dormancy7.76E-03
25GO:0055085: transmembrane transport2.18E-02
26GO:0006810: transport4.24E-02
RankGO TermAdjusted P value
1GO:0005048: signal sequence binding0.00E+00
2GO:0016209: antioxidant activity5.43E-05
3GO:0008312: 7S RNA binding1.63E-04
4GO:0017111: nucleoside-triphosphatase activity3.36E-04
5GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.23E-04
6GO:0004222: metalloendopeptidase activity8.24E-04
7GO:0016887: ATPase activity2.89E-03
8GO:0016853: isomerase activity5.77E-03
9GO:0003924: GTPase activity9.58E-03
10GO:0005525: GTP binding1.63E-02
RankGO TermAdjusted P value
1GO:0080085: signal recognition particle, chloroplast targeting6.55E-06
2GO:0048500: signal recognition particle1.32E-04
3GO:0009570: chloroplast stroma4.28E-03
4GO:0009507: chloroplast1.42E-02