co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G029055

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030494: bacteriochlorophyll biosynthetic process	0.00E+00
2	GO:0010027: thylakoid membrane organization	5.52E-06
3	GO:0009902: chloroplast relocation	8.69E-05
4	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.61E-04
5	GO:0032543: mitochondrial translation	1.99E-04
6	GO:0071722: detoxification of arsenic-containing substance	1.99E-04
7	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	1.99E-04
8	GO:0006655: phosphatidylglycerol biosynthetic process	3.91E-04
9	GO:0042793: transcription from plastid promoter	3.91E-04
10	GO:0006432: phenylalanyl-tRNA aminoacylation	4.79E-04
11	GO:0006571: tyrosine biosynthetic process	8.20E-04
12	GO:0009247: glycolipid biosynthetic process	8.20E-04
13	GO:0030259: lipid glycosylation	1.21E-03
14	GO:0006353: DNA-templated transcription, termination	1.21E-03
15	GO:0019375: galactolipid biosynthetic process	1.21E-03
16	GO:0009308: amine metabolic process	1.64E-03
17	GO:0009089: lysine biosynthetic process via diaminopimelate	1.64E-03
18	GO:0010468: regulation of gene expression	1.64E-03
19	GO:0031347: regulation of defense response	2.09E-03
20	GO:0006102: isocitrate metabolic process	2.09E-03
21	GO:0010206: photosystem II repair	2.58E-03
22	GO:0034660: ncRNA metabolic process	2.58E-03
23	GO:0032880: regulation of protein localization	2.58E-03
24	GO:0009658: chloroplast organization	2.98E-03
25	GO:0010099: regulation of photomorphogenesis	3.11E-03
26	GO:0043039: tRNA aminoacylation	3.11E-03
27	GO:0045087: innate immune response	3.71E-03
28	GO:0000302: response to reactive oxygen species	4.33E-03
29	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.64E-03
30	GO:0009612: response to mechanical stimulus	6.34E-03
31	GO:0019722: calcium-mediated signaling	6.34E-03
32	GO:0045893: positive regulation of transcription, DNA-templated	6.59E-03
33	GO:0008033: tRNA processing	7.08E-03
34	GO:0030154: cell differentiation	9.48E-03
35	GO:0008610: lipid biosynthetic process	1.03E-02
36	GO:0009627: systemic acquired resistance	1.12E-02
37	GO:0006633: fatty acid biosynthetic process	1.18E-02
38	GO:0035304: regulation of protein dephosphorylation	1.21E-02
39	GO:0009773: photosynthetic electron transport in photosystem I	1.21E-02
40	GO:0009695: jasmonic acid biosynthetic process	1.30E-02
41	GO:0009620: response to fungus	1.30E-02
42	GO:0042254: ribosome biogenesis	1.50E-02
43	GO:0009846: pollen germination	1.60E-02
44	GO:0030163: protein catabolic process	1.81E-02
45	GO:0006364: rRNA processing	1.86E-02
46	GO:0009073: aromatic amino acid family biosynthetic process	2.02E-02
47	GO:0019344: cysteine biosynthetic process	2.14E-02
48	GO:0016117: carotenoid biosynthetic process	2.14E-02
49	GO:0009790: embryo development	2.25E-02
50	GO:0006099: tricarboxylic acid cycle	2.37E-02
51	GO:0000023: maltose metabolic process	2.73E-02
52	GO:0006418: tRNA aminoacylation for protein translation	2.85E-02
53	GO:0006414: translational elongation	3.11E-02
54	GO:0015995: chlorophyll biosynthetic process	3.51E-02
55	GO:0006200: obsolete ATP catabolic process	3.93E-02
56	GO:0009965: leaf morphogenesis	4.07E-02
57	GO:0010207: photosystem II assembly	4.51E-02
58	GO:0006952: defense response	4.81E-02
59	GO:0009753: response to jasmonic acid	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0010285: L,L-diaminopimelate aminotransferase activity	0.00E+00
2	GO:0046408: chlorophyll synthetase activity	0.00E+00
3	GO:0035250: UDP-galactosyltransferase activity	1.99E-04
4	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.99E-04
5	GO:0008194: UDP-glycosyltransferase activity	1.99E-04
6	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.99E-04
7	GO:0008977: prephenate dehydrogenase (NAD+) activity	4.79E-04
8	GO:0004826: phenylalanine-tRNA ligase activity	4.79E-04
9	GO:0004665: prephenate dehydrogenase (NADP+) activity	4.79E-04
10	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.79E-04
11	GO:0032549: ribonucleoside binding	8.20E-04
12	GO:0004252: serine-type endopeptidase activity	1.05E-03
13	GO:0016209: antioxidant activity	1.21E-03
14	GO:0033926: glycopeptide alpha-N-acetylgalactosaminidase activity	1.21E-03
15	GO:0004659: prenyltransferase activity	1.21E-03
16	GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor	2.58E-03
17	GO:0008266: poly(U) RNA binding	3.71E-03
18	GO:0000049: tRNA binding	4.33E-03
19	GO:0043531: ADP binding	5.64E-03
20	GO:0003690: double-stranded DNA binding	5.64E-03
21	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.02E-03
22	GO:0048038: quinone binding	7.85E-03
23	GO:0031072: heat shock protein binding	1.30E-02
24	GO:0004222: metalloendopeptidase activity	1.50E-02
25	GO:0019843: rRNA binding	1.60E-02
26	GO:0000287: magnesium ion binding	1.86E-02
27	GO:0005525: GTP binding	2.36E-02
28	GO:0003746: translation elongation factor activity	2.49E-02
29	GO:0004812: aminoacyl-tRNA ligase activity	3.11E-02
30	GO:0030246: carbohydrate binding	3.51E-02
31	GO:0016758: transferase activity, transferring hexosyl groups	3.51E-02
32	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.65E-02
33	GO:0016746: transferase activity, transferring acyl groups	4.37E-02
34	GO:0003924: GTPase activity	4.38E-02
35	GO:0015035: protein disulfide oxidoreductase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	8.74E-09
2	GO:0009570: chloroplast stroma	3.11E-05
3	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	1.99E-04
4	GO:0009534: chloroplast thylakoid	4.03E-04
5	GO:0009533: chloroplast stromal thylakoid	4.79E-04
6	GO:0009532: plastid stroma	3.11E-03
7	GO:0009295: nucleoid	5.64E-03
8	GO:0042651: thylakoid membrane	7.08E-03
9	GO:0009941: chloroplast envelope	1.02E-02
10	GO:0009706: chloroplast inner membrane	1.50E-02
11	GO:0010319: stromule	2.37E-02
12	GO:0009535: chloroplast thylakoid membrane	2.65E-02
13	GO:0030529: intracellular ribonucleoprotein complex	3.42E-02