Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G027723

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006412: translation3.39E-15
2GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.50E-10
3GO:0032544: plastid translation1.60E-06
4GO:0010207: photosystem II assembly2.01E-06
5GO:0010027: thylakoid membrane organization4.94E-06
6GO:0006098: pentose-phosphate shunt9.61E-06
7GO:0009773: photosynthetic electron transport in photosystem I3.68E-05
8GO:0006364: rRNA processing3.79E-05
9GO:0009902: chloroplast relocation8.13E-05
10GO:0006573: valine metabolic process1.93E-04
11GO:0009768: photosynthesis, light harvesting in photosystem I1.93E-04
12GO:0006354: DNA-templated transcription, elongation2.10E-04
13GO:0045036: protein targeting to chloroplast3.13E-04
14GO:0015995: chlorophyll biosynthetic process3.79E-04
15GO:0042372: phylloquinone biosynthetic process4.65E-04
16GO:0010304: PSII associated light-harvesting complex II catabolic process1.18E-03
17GO:0006662: glycerol ether metabolic process1.78E-03
18GO:0045454: cell redox homeostasis2.28E-03
19GO:0010206: photosystem II repair2.50E-03
20GO:0009765: photosynthesis, light harvesting5.46E-03
21GO:0009767: photosynthetic electron transport chain6.87E-03
22GO:0042793: transcription from plastid promoter6.87E-03
23GO:0015996: chlorophyll catabolic process7.62E-03
24GO:0009657: plastid organization9.19E-03
25GO:0018298: protein-chromophore linkage1.00E-02
26GO:0009817: defense response to fungus, incompatible interaction1.26E-02
27GO:0009735: response to cytokinin1.85E-02
28GO:0016117: carotenoid biosynthetic process2.07E-02
29GO:0009790: embryo development2.18E-02
30GO:0009658: chloroplast organization2.77E-02
31GO:0006812: cation transport3.40E-02
32GO:0030001: metal ion transport3.67E-02
33GO:0022900: electron transport chain3.67E-02
RankGO TermAdjusted P value
1GO:0031409: pigment binding0.00E+00
2GO:0030267: glyoxylate reductase (NADP) activity0.00E+00
3GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity0.00E+00
4GO:0003735: structural constituent of ribosome1.24E-14
5GO:0019843: rRNA binding7.06E-05
6GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.93E-04
7GO:0034256: chlorophyll(ide) b reductase activity1.93E-04
8GO:0015035: protein disulfide oxidoreductase activity6.99E-04
9GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.59E-03
10GO:0000049: tRNA binding4.19E-03
11GO:0009055: electron carrier activity5.34E-03
12GO:0016168: chlorophyll binding1.00E-02
13GO:0051537: 2 iron, 2 sulfur cluster binding1.26E-02
14GO:0031072: heat shock protein binding1.26E-02
15GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.54E-02
16GO:0051287: NAD binding4.97E-02
RankGO TermAdjusted P value
1GO:0009782: photosystem I antenna complex0.00E+00
2GO:0009507: chloroplast1.19E-21
3GO:0005840: ribosome9.09E-18
4GO:0009570: chloroplast stroma1.56E-16
5GO:0009941: chloroplast envelope1.24E-11
6GO:0030529: intracellular ribonucleoprotein complex6.17E-07
7GO:0009579: thylakoid3.09E-06
8GO:0005622: intracellular6.99E-06
9GO:0000311: plastid large ribosomal subunit1.93E-04
10GO:0015934: large ribosomal subunit2.20E-03
11GO:0009535: chloroplast thylakoid membrane5.91E-03
12GO:0009543: chloroplast thylakoid lumen6.87E-03
13GO:0009523: photosystem II1.85E-02
14GO:0009534: chloroplast thylakoid3.40E-02