co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G026015

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035436: triose phosphate transmembrane transport	0.00E+00
2	GO:0015714: phosphoenolpyruvate transport	0.00E+00
3	GO:0030243: cellulose metabolic process	0.00E+00
4	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
5	GO:0055070: copper ion homeostasis	0.00E+00
6	GO:0089722: phosphoenolpyruvate transmembrane transport	0.00E+00
7	GO:0042550: photosystem I stabilization	0.00E+00
8	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	0.00E+00
9	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
10	GO:0042221: response to chemical	0.00E+00
11	GO:0042549: photosystem II stabilization	0.00E+00
12	GO:0015979: photosynthesis	1.21E-23
13	GO:0010207: photosystem II assembly	1.19E-15
14	GO:0009773: photosynthetic electron transport in photosystem I	5.36E-11
15	GO:0006098: pentose-phosphate shunt	5.62E-11
16	GO:0043085: positive regulation of catalytic activity	1.20E-09
17	GO:0006364: rRNA processing	1.82E-08
18	GO:0000023: maltose metabolic process	1.76E-07
19	GO:0019252: starch biosynthetic process	2.91E-07
20	GO:0015995: chlorophyll biosynthetic process	5.46E-07
21	GO:0070838: divalent metal ion transport	8.41E-07
22	GO:0009772: photosynthetic electron transport in photosystem II	8.41E-07
23	GO:0009637: response to blue light	1.86E-06
24	GO:0010114: response to red light	2.75E-06
25	GO:0009657: plastid organization	3.48E-06
26	GO:0030003: cellular cation homeostasis	3.66E-06
27	GO:0010218: response to far red light	3.96E-06
28	GO:0010027: thylakoid membrane organization	4.68E-06
29	GO:0010103: stomatal complex morphogenesis	6.02E-06
30	GO:0035304: regulation of protein dephosphorylation	7.71E-06
31	GO:0009902: chloroplast relocation	2.23E-05
32	GO:0009765: photosynthesis, light harvesting	3.10E-05
33	GO:0019344: cysteine biosynthetic process	4.38E-05
34	GO:0016117: carotenoid biosynthetic process	4.38E-05
35	GO:0010196: nonphotochemical quenching	5.16E-05
36	GO:0009595: detection of biotic stimulus	5.16E-05
37	GO:0043900: regulation of multi-organism process	9.40E-05
38	GO:0042742: defense response to bacterium	1.03E-04
39	GO:0019684: photosynthesis, light reaction	1.09E-04
40	GO:0018298: protein-chromophore linkage	1.32E-04
41	GO:0080167: response to karrikin	1.37E-04
42	GO:0015986: ATP synthesis coupled proton transport	2.20E-04
43	GO:0009108: coenzyme biosynthetic process	2.21E-04
44	GO:0009106: lipoate metabolic process	2.21E-04
45	GO:0006766: vitamin metabolic process	2.21E-04
46	GO:0010310: regulation of hydrogen peroxide metabolic process	3.06E-04
47	GO:0009072: aromatic amino acid family metabolic process	4.04E-04
48	GO:0009768: photosynthesis, light harvesting in photosystem I	4.14E-04
49	GO:0019676: ammonia assimilation cycle	4.14E-04
50	GO:0009697: salicylic acid biosynthetic process	6.42E-04
51	GO:0006814: sodium ion transport	6.42E-04
52	GO:0016556: mRNA modification	6.42E-04
53	GO:0019761: glucosinolate biosynthetic process	6.69E-04
54	GO:0006546: glycine catabolic process	7.82E-04
55	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.82E-04
56	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.07E-04
57	GO:0006875: cellular metal ion homeostasis	9.68E-04
58	GO:0006636: unsaturated fatty acid biosynthetic process	1.29E-03
59	GO:0009409: response to cold	1.57E-03
60	GO:0019760: glucosinolate metabolic process	1.63E-03
61	GO:0006733: oxidoreduction coenzyme metabolic process	1.63E-03
62	GO:0051289: protein homotetramerization	1.63E-03
63	GO:0009966: regulation of signal transduction	1.92E-03
64	GO:0006612: protein targeting to membrane	2.15E-03
65	GO:0010200: response to chitin	2.15E-03
66	GO:0050821: protein stabilization	2.36E-03
67	GO:0016485: protein processing	2.36E-03
68	GO:0019216: regulation of lipid metabolic process	2.36E-03
69	GO:0051260: protein homooligomerization	2.36E-03
70	GO:0009117: nucleotide metabolic process	2.36E-03
71	GO:0045037: protein import into chloroplast stroma	2.36E-03
72	GO:0010363: regulation of plant-type hypersensitive response	2.39E-03
73	GO:0009867: jasmonic acid mediated signaling pathway	2.66E-03
74	GO:0031348: negative regulation of defense response	2.66E-03
75	GO:0009695: jasmonic acid biosynthetic process	2.66E-03
76	GO:0006796: phosphate-containing compound metabolic process	3.20E-03
77	GO:0000096: sulfur amino acid metabolic process	3.20E-03
78	GO:0034755: iron ion transmembrane transport	3.20E-03
79	GO:0019748: secondary metabolic process	3.20E-03
80	GO:0000165: MAPK cascade	3.93E-03
81	GO:0046688: response to copper ion	4.15E-03
82	GO:0017148: negative regulation of translation	4.15E-03
83	GO:0010206: photosystem II repair	5.16E-03
84	GO:0034660: ncRNA metabolic process	5.16E-03
85	GO:0010205: photoinhibition	5.16E-03
86	GO:0009411: response to UV	5.16E-03
87	GO:0005985: sucrose metabolic process	6.26E-03
88	GO:0015977: carbon fixation	7.44E-03
89	GO:0009658: chloroplast organization	8.25E-03
90	GO:0009832: plant-type cell wall biogenesis	8.68E-03
91	GO:0006096: glycolytic process	9.20E-03
92	GO:0006006: glucose metabolic process	1.00E-02
93	GO:0006754: ATP biosynthetic process	1.00E-02
94	GO:0009624: response to nematode	1.11E-02
95	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.14E-02
96	GO:0022900: electron transport chain	1.23E-02
97	GO:0009767: photosynthetic electron transport chain	1.43E-02
98	GO:0031408: oxylipin biosynthetic process	1.43E-02
99	GO:0042793: transcription from plastid promoter	1.43E-02
100	GO:0006108: malate metabolic process	1.43E-02
101	GO:0009750: response to fructose	1.75E-02
102	GO:0016049: cell growth	1.75E-02
103	GO:0006833: water transport	1.75E-02
104	GO:0050832: defense response to fungus	1.89E-02
105	GO:0015992: proton transport	1.92E-02
106	GO:0009749: response to glucose	1.92E-02
107	GO:0016126: sterol biosynthetic process	1.92E-02
108	GO:0010155: regulation of proton transport	2.10E-02
109	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2.10E-02
110	GO:0010193: response to ozone	2.27E-02
111	GO:0046777: protein autophosphorylation	2.46E-02
112	GO:0009817: defense response to fungus, incompatible interaction	2.65E-02
113	GO:0009853: photorespiration	3.26E-02
114	GO:0000413: protein peptidyl-prolyl isomerization	3.47E-02
115	GO:0009735: response to cytokinin	3.91E-02
116	GO:0055114: oxidation-reduction process	4.12E-02
117	GO:0006662: glycerol ether metabolic process	4.13E-02
118	GO:0009737: response to abscisic acid	4.15E-02
119	GO:0045454: cell redox homeostasis	4.29E-02
120	GO:0006811: ion transport	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
2	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
3	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	0.00E+00
4	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
5	GO:0010242: oxygen evolving activity	0.00E+00
6	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
7	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
8	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
9	GO:0009670: triose-phosphate:phosphate antiporter activity	0.00E+00
10	GO:0051738: xanthophyll binding	0.00E+00
11	GO:0016168: chlorophyll binding	1.62E-09
12	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.16E-07
13	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.10E-05
14	GO:0004332: fructose-bisphosphate aldolase activity	5.16E-05
15	GO:0015140: malate transmembrane transporter activity	4.14E-04
16	GO:0008974: phosphoribulokinase activity	4.14E-04
17	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	4.14E-04
18	GO:0004618: phosphoglycerate kinase activity	4.14E-04
19	GO:0015088: copper uptake transmembrane transporter activity	4.14E-04
20	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	9.68E-04
21	GO:0051920: peroxiredoxin activity	9.68E-04
22	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	9.68E-04
23	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	1.63E-03
24	GO:0005215: transporter activity	2.27E-03
25	GO:0016209: antioxidant activity	2.36E-03
26	GO:0016984: ribulose-bisphosphate carboxylase activity	2.36E-03
27	GO:0051537: 2 iron, 2 sulfur cluster binding	2.66E-03
28	GO:0004470: malic enzyme activity	3.20E-03
29	GO:0005381: iron ion transmembrane transporter activity	3.20E-03
30	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.16E-03
31	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.16E-03
32	GO:0004427: inorganic diphosphatase activity	7.44E-03
33	GO:0042578: phosphoric ester hydrolase activity	7.44E-03
34	GO:0008266: poly(U) RNA binding	7.44E-03
35	GO:0003690: double-stranded DNA binding	1.14E-02
36	GO:0042803: protein homodimerization activity	1.30E-02
37	GO:0016829: lyase activity	1.31E-02
38	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.59E-02
39	GO:0015035: protein disulfide oxidoreductase activity	1.73E-02
40	GO:0004713: protein tyrosine kinase activity	1.75E-02
41	GO:0051287: NAD binding	1.89E-02
42	GO:0008080: N-acetyltransferase activity	1.92E-02
43	GO:0051536: iron-sulfur cluster binding	1.98E-02
44	GO:0005509: calcium ion binding	2.18E-02
45	GO:0009055: electron carrier activity	2.66E-02
46	GO:0015078: hydrogen ion transmembrane transporter activity	2.85E-02
47	GO:0016597: amino acid binding	3.26E-02
48	GO:0051539: 4 iron, 4 sulfur cluster binding	3.68E-02
49	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.91E-02
50	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0009512: cytochrome b6f complex	0.00E+00
2	GO:0030093: chloroplast photosystem I	0.00E+00
3	GO:0009279: cell outer membrane	0.00E+00
4	GO:0009579: thylakoid	9.10E-34
5	GO:0009507: chloroplast	2.22E-33
6	GO:0009535: chloroplast thylakoid membrane	2.05E-32
7	GO:0009941: chloroplast envelope	8.39E-23
8	GO:0009522: photosystem I	3.00E-19
9	GO:0010287: plastoglobule	1.15E-16
10	GO:0031977: thylakoid lumen	1.42E-12
11	GO:0009523: photosystem II	1.38E-11
12	GO:0009538: photosystem I reaction center	5.46E-10
13	GO:0009534: chloroplast thylakoid	6.10E-10
14	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.08E-08
15	GO:0019898: extrinsic component of membrane	1.08E-08
16	GO:0009543: chloroplast thylakoid lumen	1.97E-08
17	GO:0009654: photosystem II oxygen evolving complex	2.81E-08
18	GO:0016020: membrane	2.02E-07
19	GO:0009570: chloroplast stroma	2.67E-07
20	GO:0048046: apoplast	1.55E-05
21	GO:0010319: stromule	5.89E-05
22	GO:0009508: plastid chromosome	9.40E-05
23	GO:0009517: PSII associated light-harvesting complex II	4.14E-04
24	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	4.14E-04
25	GO:0009295: nucleoid	7.82E-04
26	GO:0009533: chloroplast stromal thylakoid	9.68E-04
27	GO:0042651: thylakoid membrane	1.11E-03
28	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	5.16E-03
29	GO:0009706: chloroplast inner membrane	3.05E-02
30	GO:0009536: plastid	4.79E-02