Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G025340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006233: dTDP biosynthetic process0.00E+00
2GO:0045694: regulation of embryo sac egg cell differentiation0.00E+00
3GO:0045951: positive regulation of mitotic recombination0.00E+00
4GO:0010288: response to lead ion0.00E+00
5GO:0030307: positive regulation of cell growth1.10E-04
6GO:0048519: negative regulation of biological process1.10E-04
7GO:0003002: regionalization1.10E-04
8GO:0007062: sister chromatid cohesion2.30E-04
9GO:0042547: cell wall modification involved in multidimensional cell growth2.75E-04
10GO:0071577: zinc II ion transmembrane transport2.75E-04
11GO:0007094: mitotic spindle assembly checkpoint4.75E-04
12GO:0035434: copper ion transmembrane transport7.03E-04
13GO:0009887: animal organ morphogenesis9.63E-04
14GO:0033044: regulation of chromosome organization9.63E-04
15GO:0034755: iron ion transmembrane transport9.63E-04
16GO:0048439: flower morphogenesis9.63E-04
17GO:0009913: epidermal cell differentiation1.24E-03
18GO:0009410: response to xenobiotic stimulus1.24E-03
19GO:0006561: proline biosynthetic process1.24E-03
20GO:0051276: chromosome organization1.24E-03
21GO:0045132: meiotic chromosome segregation1.24E-03
22GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway1.55E-03
23GO:0006325: chromatin organization1.55E-03
24GO:0007155: cell adhesion1.55E-03
25GO:0008283: cell proliferation1.86E-03
26GO:0030245: cellulose catabolic process1.86E-03
27GO:0048449: floral organ formation1.86E-03
28GO:0000741: karyogamy1.86E-03
29GO:0010074: maintenance of meristem identity1.86E-03
30GO:0010228: vegetative to reproductive phase transition of meristem1.96E-03
31GO:0048765: root hair cell differentiation2.18E-03
32GO:0042138: meiotic DNA double-strand break formation2.18E-03
33GO:0008284: positive regulation of cell proliferation2.52E-03
34GO:0010051: xylem and phloem pattern formation2.52E-03
35GO:0009955: adaxial/abaxial pattern specification2.52E-03
36GO:0006826: iron ion transport2.52E-03
37GO:0045010: actin nucleation2.89E-03
38GO:0006312: mitotic recombination2.89E-03
39GO:0045893: positive regulation of transcription, DNA-templated2.98E-03
40GO:0019915: lipid storage3.28E-03
41GO:0016571: histone methylation3.70E-03
42GO:0043687: post-translational protein modification4.13E-03
43GO:0006406: mRNA export from nucleus4.13E-03
44GO:0007131: reciprocal meiotic recombination4.58E-03
45GO:0010162: seed dormancy process4.58E-03
46GO:0009855: determination of bilateral symmetry4.58E-03
47GO:0050826: response to freezing5.03E-03
48GO:0006261: DNA-dependent DNA replication5.03E-03
49GO:0042023: DNA endoreduplication5.50E-03
50GO:0016310: phosphorylation6.59E-03
51GO:0016567: protein ubiquitination6.72E-03
52GO:0010182: sugar mediated signaling pathway7.02E-03
53GO:0010090: trichome morphogenesis7.02E-03
54GO:0000278: mitotic cell cycle7.55E-03
55GO:0048367: shoot system development7.55E-03
56GO:0035556: intracellular signal transduction8.66E-03
57GO:0009845: seed germination8.66E-03
58GO:0009933: meristem structural organization9.83E-03
59GO:0006275: regulation of DNA replication9.83E-03
60GO:0006270: DNA replication initiation1.04E-02
61GO:0009560: embryo sac egg cell differentiation1.04E-02
62GO:0016579: protein deubiquitination1.17E-02
63GO:0048366: leaf development1.23E-02
64GO:0051726: regulation of cell cycle1.30E-02
65GO:0048481: plant ovule development1.57E-02
66GO:0009640: photomorphogenesis1.64E-02
67GO:0010043: response to zinc ion1.79E-02
68GO:0000398: mRNA splicing, via spliceosome1.86E-02
69GO:0009624: response to nematode2.02E-02
70GO:0030001: metal ion transport2.18E-02
71GO:0009965: leaf morphogenesis2.34E-02
72GO:0048364: root development2.34E-02
73GO:0071555: cell wall organization3.22E-02
74GO:0009909: regulation of flower development3.31E-02
RankGO TermAdjusted P value
1GO:0032791: lead ion binding0.00E+00
2GO:0004798: thymidylate kinase activity0.00E+00
3GO:0035299: inositol pentakisphosphate 2-kinase activity1.10E-04
4GO:0019905: syntaxin binding1.10E-04
5GO:0070300: phosphatidic acid binding1.10E-04
6GO:0004350: glutamate-5-semialdehyde dehydrogenase activity2.75E-04
7GO:0005385: zinc ion transmembrane transporter activity2.75E-04
8GO:0000062: fatty-acyl-CoA binding4.75E-04
9GO:0005375: copper ion transmembrane transporter activity7.03E-04
10GO:0005381: iron ion transmembrane transporter activity9.63E-04
11GO:0003713: transcription coactivator activity1.24E-03
12GO:0008810: cellulase activity1.55E-03
13GO:0004143: diacylglycerol kinase activity1.55E-03
14GO:0046873: metal ion transmembrane transporter activity2.52E-03
15GO:0003951: NAD+ kinase activity2.52E-03
16GO:0030955: potassium ion binding2.89E-03
17GO:0004743: pyruvate kinase activity2.89E-03
18GO:0031418: L-ascorbic acid binding2.89E-03
19GO:0003690: double-stranded DNA binding3.28E-03
20GO:0016301: kinase activity6.74E-03
21GO:0005524: ATP binding9.23E-03
22GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.17E-02
23GO:0008026: ATP-dependent helicase activity1.94E-02
24GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.34E-02
25GO:0004721: phosphoprotein phosphatase activity2.51E-02
26GO:0004386: helicase activity3.50E-02
27GO:0004842: ubiquitin-protein transferase activity3.89E-02
28GO:0004674: protein serine/threonine kinase activity4.42E-02
RankGO TermAdjusted P value
1GO:0035101: FACT complex0.00E+00
2GO:0005719: nuclear euchromatin1.10E-04
3GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)1.10E-04
4GO:0000776: kinetochore7.03E-04
5GO:0005681: spliceosomal complex3.28E-03
6GO:0005654: nucleoplasm5.99E-03
7GO:0009524: phragmoplast1.17E-02