co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G021219

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0006233: dTDP biosynthetic process	0.00E+00
3	GO:0032465: regulation of cytokinesis	0.00E+00
4	GO:0007049: cell cycle	2.22E-07
5	GO:0043987: histone H3-S10 phosphorylation	2.73E-06
6	GO:0016572: histone phosphorylation	3.40E-06
7	GO:0006260: DNA replication	1.53E-05
8	GO:0051301: cell division	5.10E-05
9	GO:0007059: chromosome segregation	2.62E-04
10	GO:0042276: error-prone translesion synthesis	2.62E-04
11	GO:1990426: mitotic recombination-dependent replication fork processing	2.62E-04
12	GO:0006259: DNA metabolic process	3.27E-04
13	GO:0010389: regulation of G2/M transition of mitotic cell cycle	4.82E-04
14	GO:0006281: DNA repair	5.40E-04
15	GO:0009956: radial pattern formation	6.18E-04
16	GO:0009755: hormone-mediated signaling pathway	6.18E-04
17	GO:0007018: microtubule-based movement	7.68E-04
18	GO:0009966: regulation of signal transduction	1.01E-03
19	GO:0022904: respiratory electron transport chain	1.06E-03
20	GO:0008654: phospholipid biosynthetic process	1.55E-03
21	GO:0008356: asymmetric cell division	1.55E-03
22	GO:0006275: regulation of DNA replication	2.07E-03
23	GO:0006265: DNA topological change	2.08E-03
24	GO:0006084: acetyl-CoA metabolic process	3.31E-03
25	GO:0010583: response to cyclopentenone	3.31E-03
26	GO:0055072: iron ion homeostasis	3.31E-03
27	GO:0009934: regulation of meristem structural organization	3.31E-03
28	GO:0048449: floral organ formation	4.02E-03
29	GO:0010074: maintenance of meristem identity	4.02E-03
30	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.77E-03
31	GO:0006302: double-strand break repair	4.77E-03
32	GO:0061025: membrane fusion	4.77E-03
33	GO:0009451: RNA modification	5.55E-03
34	GO:0016570: histone modification	6.38E-03
35	GO:0010048: vernalization response	6.38E-03
36	GO:0006284: base-excision repair	6.38E-03
37	GO:0006974: cellular response to DNA damage stimulus	7.27E-03
38	GO:0051225: spindle assembly	7.27E-03
39	GO:0019915: lipid storage	7.27E-03
40	GO:0001522: pseudouridine synthesis	8.18E-03
41	GO:0016571: histone methylation	8.18E-03
42	GO:0010332: response to gamma radiation	8.18E-03
43	GO:0009607: response to biotic stimulus	9.13E-03
44	GO:0006406: mRNA export from nucleus	9.13E-03
45	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.01E-02
46	GO:0010162: seed dormancy process	1.01E-02
47	GO:0006446: regulation of translational initiation	1.01E-02
48	GO:0016049: cell growth	1.11E-02
49	GO:0050826: response to freezing	1.11E-02
50	GO:0001731: formation of translation preinitiation complex	1.11E-02
51	GO:0009909: regulation of flower development	1.17E-02
52	GO:0000902: cell morphogenesis	1.22E-02
53	GO:0016126: sterol biosynthetic process	1.22E-02
54	GO:0000724: double-strand break repair via homologous recombination	1.22E-02
55	GO:0006310: DNA recombination	1.33E-02
56	GO:0008219: cell death	1.33E-02
57	GO:0044267: cellular protein metabolic process	1.33E-02
58	GO:0010182: sugar mediated signaling pathway	1.56E-02
59	GO:0000278: mitotic cell cycle	1.68E-02
60	GO:0051258: protein polymerization	1.68E-02
61	GO:0007017: microtubule-based process	1.94E-02
62	GO:0009845: seed germination	1.94E-02
63	GO:0016567: protein ubiquitination	2.13E-02
64	GO:0009933: meristem structural organization	2.20E-02
65	GO:0000226: microtubule cytoskeleton organization	2.33E-02
66	GO:0048193: Golgi vesicle transport	2.48E-02
67	GO:0006397: mRNA processing	2.62E-02
68	GO:0016579: protein deubiquitination	2.62E-02
69	GO:0048366: leaf development	2.76E-02
70	GO:0051726: regulation of cell cycle	2.91E-02
71	GO:0000911: cytokinesis by cell plate formation	3.37E-02
72	GO:0009640: photomorphogenesis	3.69E-02
73	GO:0008283: cell proliferation	4.55E-02
74	GO:0010228: vegetative to reproductive phase transition of meristem	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
2	GO:0008409: 5'-3' exonuclease activity	0.00E+00
3	GO:0004798: thymidylate kinase activity	0.00E+00
4	GO:0035175: histone kinase activity (H3-S10 specific)	2.73E-06
5	GO:0030337: DNA polymerase processivity factor activity	2.62E-04
6	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.62E-04
7	GO:0017108: 5'-flap endonuclease activity	2.62E-04
8	GO:0000150: recombinase activity	2.62E-04
9	GO:0003916: DNA topoisomerase activity	2.62E-04
10	GO:0003777: microtubule motor activity	7.68E-04
11	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.06E-03
12	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.06E-03
13	GO:0008017: microtubule binding	1.52E-03
14	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.55E-03
15	GO:0008536: Ran GTPase binding	2.65E-03
16	GO:0008094: DNA-dependent ATPase activity	4.02E-03
17	GO:0043022: ribosome binding	4.02E-03
18	GO:0009982: pseudouridine synthase activity	5.55E-03
19	GO:0004518: nuclease activity	6.38E-03
20	GO:0005484: SNAP receptor activity	6.38E-03
21	GO:0003684: damaged DNA binding	6.38E-03
22	GO:0003697: single-stranded DNA binding	7.27E-03
23	GO:0003690: double-stranded DNA binding	7.27E-03
24	GO:0004519: endonuclease activity	8.18E-03
25	GO:0004527: exonuclease activity	1.01E-02
26	GO:0019901: protein kinase binding	1.11E-02
27	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.11E-02
28	GO:0005200: structural constituent of cytoskeleton	1.45E-02
29	GO:0008565: protein transporter activity	1.68E-02
30	GO:0051082: unfolded protein binding	1.82E-02
31	GO:0005524: ATP binding	2.10E-02
32	GO:0000166: nucleotide binding	2.76E-02
33	GO:0005516: calmodulin binding	3.86E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0043626: PCNA complex	2.62E-04
3	GO:0005874: microtubule	3.49E-04
4	GO:0005871: kinesin complex	7.15E-04
5	GO:0005654: nucleoplasm	1.01E-03
6	GO:0031966: mitochondrial membrane	1.01E-03
7	GO:0000775: chromosome, centromeric region	1.06E-03
8	GO:0005971: ribonucleoside-diphosphate reductase complex	1.06E-03
9	GO:0005819: spindle	1.42E-03
10	GO:0005875: microtubule associated complex	3.06E-03
11	GO:0012505: endomembrane system	3.31E-03
12	GO:0016272: prefoldin complex	4.02E-03
13	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.02E-03
14	GO:0045271: respiratory chain complex I	5.18E-03
15	GO:0005743: mitochondrial inner membrane	6.81E-03
16	GO:0005643: nuclear pore	1.01E-02
17	GO:0016282: eukaryotic 43S preinitiation complex	1.11E-02
18	GO:0033290: eukaryotic 48S preinitiation complex	1.11E-02
19	GO:0005852: eukaryotic translation initiation factor 3 complex	1.22E-02
20	GO:0009504: cell plate	1.22E-02
21	GO:0043234: protein complex	1.81E-02
22	GO:0005634: nucleus	1.84E-02
23	GO:0005635: nuclear envelope	1.94E-02
24	GO:0005694: chromosome	2.54E-02
25	GO:0009524: phragmoplast	2.62E-02
26	GO:0005730: nucleolus	2.68E-02
27	GO:0005747: mitochondrial respiratory chain complex I	4.37E-02
28	GO:0005856: cytoskeleton	4.37E-02