co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G018941

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043987: histone H3-S10 phosphorylation	0.00E+00
2	GO:0031508: pericentric heterochromatin assembly	0.00E+00
3	GO:0006268: DNA unwinding involved in DNA replication	0.00E+00
4	GO:0032465: regulation of cytokinesis	0.00E+00
5	GO:0010425: DNA methylation on cytosine within a CNG sequence	0.00E+00
6	GO:0032776: DNA methylation on cytosine	0.00E+00
7	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
8	GO:0006233: dTDP biosynthetic process	0.00E+00
9	GO:0006260: DNA replication	3.91E-12
10	GO:0007049: cell cycle	2.54E-10
11	GO:0006342: chromatin silencing	6.19E-08
12	GO:0016572: histone phosphorylation	6.19E-08
13	GO:0051567: histone H3-K9 methylation	6.98E-08
14	GO:0006306: DNA methylation	1.05E-07
15	GO:0007018: microtubule-based movement	3.07E-07
16	GO:0006275: regulation of DNA replication	3.47E-07
17	GO:0010389: regulation of G2/M transition of mitotic cell cycle	4.55E-07
18	GO:0009909: regulation of flower development	1.93E-06
19	GO:0045814: negative regulation of gene expression, epigenetic	4.27E-06
20	GO:0010069: zygote asymmetric cytokinesis in embryo sac	4.27E-06
21	GO:0051301: cell division	5.57E-06
22	GO:0006270: DNA replication initiation	1.44E-05
23	GO:0032508: DNA duplex unwinding	2.57E-05
24	GO:0090116: C-5 methylation of cytosine	3.58E-05
25	GO:0009966: regulation of signal transduction	8.37E-05
26	GO:0048449: floral organ formation	2.21E-04
27	GO:0000226: microtubule cytoskeleton organization	2.86E-04
28	GO:0042276: error-prone translesion synthesis	3.35E-04
29	GO:1990426: mitotic recombination-dependent replication fork processing	3.35E-04
30	GO:0009971: anastral spindle assembly involved in male meiosis	3.35E-04
31	GO:0007059: chromosome segregation	3.35E-04
32	GO:0051726: regulation of cell cycle	4.47E-04
33	GO:0006259: DNA metabolic process	4.72E-04
34	GO:0048453: sepal formation	4.72E-04
35	GO:0048451: petal formation	5.75E-04
36	GO:0009755: hormone-mediated signaling pathway	7.87E-04
37	GO:0009956: radial pattern formation	7.87E-04
38	GO:0009186: deoxyribonucleoside diphosphate metabolic process	7.87E-04
39	GO:0006281: DNA repair	9.54E-04
40	GO:0009294: DNA mediated transformation	9.55E-04
41	GO:0008283: cell proliferation	1.06E-03
42	GO:0009957: epidermal cell fate specification	1.33E-03
43	GO:0007094: mitotic spindle assembly checkpoint	1.33E-03
44	GO:0032147: activation of protein kinase activity	1.94E-03
45	GO:0008356: asymmetric cell division	1.94E-03
46	GO:0010082: regulation of root meristem growth	2.61E-03
47	GO:0060236: regulation of mitotic spindle organization	2.61E-03
48	GO:0006265: DNA topological change	2.61E-03
49	GO:0007267: cell-cell signaling	3.37E-03
50	GO:0006325: chromatin organization	4.21E-03
51	GO:0055072: iron ion homeostasis	4.21E-03
52	GO:0009934: regulation of meristem structural organization	4.21E-03
53	GO:0006084: acetyl-CoA metabolic process	4.21E-03
54	GO:0010074: maintenance of meristem identity	5.09E-03
55	GO:0000911: cytokinesis by cell plate formation	5.36E-03
56	GO:0006302: double-strand break repair	6.04E-03
57	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.04E-03
58	GO:0042127: regulation of cell proliferation	7.06E-03
59	GO:0010048: vernalization response	8.11E-03
60	GO:0006284: base-excision repair	8.11E-03
61	GO:0012501: programmed cell death	8.11E-03
62	GO:0009616: virus induced gene silencing	8.11E-03
63	GO:0016570: histone modification	8.11E-03
64	GO:0010228: vegetative to reproductive phase transition of meristem	8.67E-03
65	GO:0007020: microtubule nucleation	9.23E-03
66	GO:0019915: lipid storage	9.23E-03
67	GO:0006974: cellular response to DNA damage stimulus	9.23E-03
68	GO:0051225: spindle assembly	9.23E-03
69	GO:0016571: histone methylation	1.04E-02
70	GO:0009165: nucleotide biosynthetic process	1.04E-02
71	GO:0010332: response to gamma radiation	1.04E-02
72	GO:0031048: chromatin silencing by small RNA	1.16E-02
73	GO:0048316: seed development	1.16E-02
74	GO:0006406: mRNA export from nucleus	1.16E-02
75	GO:0010162: seed dormancy process	1.29E-02
76	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.29E-02
77	GO:0050826: response to freezing	1.42E-02
78	GO:0007062: sister chromatid cohesion	1.42E-02
79	GO:0006261: DNA-dependent DNA replication	1.42E-02
80	GO:0000724: double-strand break repair via homologous recombination	1.56E-02
81	GO:0035196: production of miRNAs involved in gene silencing by miRNA	1.70E-02
82	GO:0010267: production of ta-siRNAs involved in RNA interference	1.70E-02
83	GO:0006310: DNA recombination	1.70E-02
84	GO:0010182: sugar mediated signaling pathway	1.99E-02
85	GO:0000278: mitotic cell cycle	2.15E-02
86	GO:0009553: embryo sac development	2.15E-02
87	GO:0006346: methylation-dependent chromatin silencing	2.15E-02
88	GO:0009845: seed germination	2.47E-02
89	GO:0031047: gene silencing by RNA	2.64E-02
90	GO:0009933: meristem structural organization	2.81E-02
91	GO:0009560: embryo sac egg cell differentiation	2.98E-02
92	GO:0016579: protein deubiquitination	3.34E-02
93	GO:0048366: leaf development	3.53E-02
94	GO:0009790: embryo development	3.72E-02
95	GO:0009640: photomorphogenesis	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0035175: histone kinase activity (H3-S10 specific)	0.00E+00
2	GO:0004798: thymidylate kinase activity	0.00E+00
3	GO:0008409: 5'-3' exonuclease activity	0.00E+00
4	GO:0003777: microtubule motor activity	3.07E-07
5	GO:0008017: microtubule binding	1.50E-06
6	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	4.27E-06
7	GO:0003678: DNA helicase activity	1.36E-05
8	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.55E-05
9	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	3.58E-05
10	GO:0005524: ATP binding	2.45E-04
11	GO:0010429: methyl-CpNpN binding	3.35E-04
12	GO:0017108: 5'-flap endonuclease activity	3.35E-04
13	GO:0000150: recombinase activity	3.35E-04
14	GO:0003916: DNA topoisomerase activity	3.35E-04
15	GO:0030337: DNA polymerase processivity factor activity	3.35E-04
16	GO:0008327: methyl-CpG binding	3.35E-04
17	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.35E-04
18	GO:0010428: methyl-CpNpG binding	3.35E-04
19	GO:0003688: DNA replication origin binding	7.87E-04
20	GO:0003677: DNA binding	7.91E-04
21	GO:0010385: double-stranded methylated DNA binding	1.33E-03
22	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.94E-03
23	GO:0003887: DNA-directed DNA polymerase activity	5.09E-03
24	GO:0008094: DNA-dependent ATPase activity	5.09E-03
25	GO:0004518: nuclease activity	8.11E-03
26	GO:0003684: damaged DNA binding	8.11E-03
27	GO:0046914: transition metal ion binding	8.11E-03
28	GO:0003682: chromatin binding	8.40E-03
29	GO:0003697: single-stranded DNA binding	9.23E-03
30	GO:0003690: double-stranded DNA binding	9.23E-03
31	GO:0000166: nucleotide binding	1.01E-02
32	GO:0004519: endonuclease activity	1.04E-02
33	GO:0004527: exonuclease activity	1.29E-02
34	GO:0019901: protein kinase binding	1.42E-02
35	GO:0042393: histone binding	2.30E-02
36	GO:0016772: transferase activity, transferring phosphorus-containing groups	4.05E-02
37	GO:0004674: protein serine/threonine kinase activity	4.05E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005871: kinesin complex	2.60E-07
3	GO:0005819: spindle	5.19E-06
4	GO:0005874: microtubule	5.21E-06
5	GO:0042555: MCM complex	6.14E-06
6	GO:0005971: ribonucleoside-diphosphate reductase complex	1.55E-05
7	GO:0005875: microtubule associated complex	2.81E-05
8	GO:0005634: nucleus	2.64E-04
9	GO:0043626: PCNA complex	3.35E-04
10	GO:0000347: THO complex	3.35E-04
11	GO:0010369: chromocenter	3.35E-04
12	GO:0000775: chromosome, centromeric region	1.33E-03
13	GO:0005654: nucleoplasm	1.43E-03
14	GO:0000776: kinetochore	1.94E-03
15	GO:0005876: spindle microtubule	1.94E-03
16	GO:0009524: phragmoplast	3.73E-03
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	5.09E-03
18	GO:0005730: nucleolus	1.74E-02
19	GO:0005635: nuclear envelope	2.47E-02
20	GO:0005694: chromosome	3.58E-02