co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G017419

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000505: regulation of energy homeostasis	0.00E+00
2	GO:0030243: cellulose metabolic process	0.00E+00
3	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
4	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
5	GO:0010207: photosystem II assembly	1.44E-12
6	GO:0009657: plastid organization	6.44E-09
7	GO:0006364: rRNA processing	9.08E-09
8	GO:0009773: photosynthetic electron transport in photosystem I	1.82E-08
9	GO:0043085: positive regulation of catalytic activity	5.91E-08
10	GO:0070838: divalent metal ion transport	1.77E-07
11	GO:0019761: glucosinolate biosynthetic process	2.23E-07
12	GO:0019252: starch biosynthetic process	3.67E-07
13	GO:0006098: pentose-phosphate shunt	7.32E-07
14	GO:0030003: cellular cation homeostasis	7.84E-07
15	GO:0035304: regulation of protein dephosphorylation	1.15E-06
16	GO:0016117: carotenoid biosynthetic process	7.12E-06
17	GO:0010027: thylakoid membrane organization	7.66E-06
18	GO:0000023: maltose metabolic process	1.50E-05
19	GO:0015979: photosynthesis	1.92E-05
20	GO:0015995: chlorophyll biosynthetic process	3.16E-05
21	GO:0009772: photosynthetic electron transport in photosystem II	3.27E-05
22	GO:0046777: protein autophosphorylation	4.87E-05
23	GO:0009637: response to blue light	1.74E-04
24	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.03E-04
25	GO:0010114: response to red light	2.17E-04
26	GO:0071482: cellular response to light stimulus	2.19E-04
27	GO:0006021: inositol biosynthetic process	2.19E-04
28	GO:0009590: detection of gravity	2.19E-04
29	GO:0009768: photosynthesis, light harvesting in photosystem I	2.19E-04
30	GO:0019676: ammonia assimilation cycle	2.19E-04
31	GO:0006814: sodium ion transport	2.53E-04
32	GO:0010218: response to far red light	2.66E-04
33	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	3.12E-04
34	GO:0042742: defense response to bacterium	4.98E-04
35	GO:0010236: plastoquinone biosynthetic process	5.25E-04
36	GO:0009664: plant-type cell wall organization	7.95E-04
37	GO:0010155: regulation of proton transport	7.95E-04
38	GO:0019760: glucosinolate metabolic process	8.95E-04
39	GO:0015986: ATP synthesis coupled proton transport	1.13E-03
40	GO:0009409: response to cold	1.22E-03
41	GO:0009595: detection of biotic stimulus	1.32E-03
42	GO:0010196: nonphotochemical quenching	1.32E-03
43	GO:0016485: protein processing	1.32E-03
44	GO:0071704: organic substance metabolic process	1.32E-03
45	GO:0043900: regulation of multi-organism process	1.78E-03
46	GO:0019344: cysteine biosynthetic process	2.26E-03
47	GO:0009693: ethylene biosynthetic process	2.27E-03
48	GO:0010205: photoinhibition	2.81E-03
49	GO:0010206: photosystem II repair	2.81E-03
50	GO:0005985: sucrose metabolic process	3.41E-03
51	GO:0046939: nucleotide phosphorylation	3.41E-03
52	GO:0000272: polysaccharide catabolic process	3.41E-03
53	GO:0010310: regulation of hydrogen peroxide metabolic process	3.41E-03
54	GO:0019853: L-ascorbic acid biosynthetic process	3.41E-03
55	GO:0009658: chloroplast organization	3.41E-03
56	GO:0009624: response to nematode	4.59E-03
57	GO:0009832: plant-type cell wall biogenesis	4.73E-03
58	GO:0005983: starch catabolic process	4.73E-03
59	GO:0006354: DNA-templated transcription, elongation	5.42E-03
60	GO:0006006: glucose metabolic process	5.42E-03
61	GO:0009697: salicylic acid biosynthetic process	5.42E-03
62	GO:0006754: ATP biosynthetic process	5.42E-03
63	GO:0009765: photosynthesis, light harvesting	6.16E-03
64	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.16E-03
65	GO:0046854: phosphatidylinositol phosphorylation	6.94E-03
66	GO:0042631: cellular response to water deprivation	6.94E-03
67	GO:0044262: cellular carbohydrate metabolic process	7.75E-03
68	GO:0006108: malate metabolic process	7.75E-03
69	GO:0006636: unsaturated fatty acid biosynthetic process	8.59E-03
70	GO:0016049: cell growth	9.46E-03
71	GO:0006833: water transport	9.46E-03
72	GO:0009750: response to fructose	9.46E-03
73	GO:0016126: sterol biosynthetic process	1.03E-02
74	GO:0015992: proton transport	1.03E-02
75	GO:0009966: regulation of signal transduction	1.13E-02
76	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.13E-02
77	GO:0018298: protein-chromophore linkage	1.13E-02
78	GO:0010103: stomatal complex morphogenesis	1.23E-02
79	GO:0010200: response to chitin	1.23E-02
80	GO:0010193: response to ozone	1.23E-02
81	GO:0006612: protein targeting to membrane	1.23E-02
82	GO:0080167: response to karrikin	1.29E-02
83	GO:0010363: regulation of plant-type hypersensitive response	1.32E-02
84	GO:0006139: nucleobase-containing compound metabolic process	1.32E-02
85	GO:0009867: jasmonic acid mediated signaling pathway	1.43E-02
86	GO:0031348: negative regulation of defense response	1.43E-02
87	GO:0045454: cell redox homeostasis	1.78E-02
88	GO:0009902: chloroplast relocation	1.86E-02
89	GO:0000165: MAPK cascade	1.86E-02
90	GO:0006520: cellular amino acid metabolic process	1.86E-02
91	GO:0030163: protein catabolic process	1.98E-02
92	GO:0009735: response to cytokinin	2.10E-02
93	GO:0006662: glycerol ether metabolic process	2.21E-02
94	GO:0006811: ion transport	2.46E-02
95	GO:0006099: tricarboxylic acid cycle	2.59E-02
96	GO:0016311: dephosphorylation	3.27E-02
97	GO:0009744: response to sucrose	3.41E-02
98	GO:0006812: cation transport	3.85E-02
99	GO:0022900: electron transport chain	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0004614: phosphoglucomutase activity	0.00E+00
2	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
3	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
4	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
5	GO:0010347: L-galactose-1-phosphate phosphatase activity	0.00E+00
6	GO:0019200: carbohydrate kinase activity	0.00E+00
7	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
8	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
9	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
10	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
11	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
12	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
13	GO:0008934: inositol monophosphate 1-phosphatase activity	0.00E+00
14	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
15	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
16	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	2.19E-04
17	GO:0015140: malate transmembrane transporter activity	2.19E-04
18	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.12E-04
19	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	5.25E-04
20	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	5.25E-04
21	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	5.25E-04
22	GO:0004659: prenyltransferase activity	1.32E-03
23	GO:0016868: intramolecular transferase activity, phosphotransferases	1.78E-03
24	GO:0004017: adenylate kinase activity	1.78E-03
25	GO:0019201: nucleotide kinase activity	2.81E-03
26	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.81E-03
27	GO:0019205: nucleobase-containing compound kinase activity	2.81E-03
28	GO:0016615: malate dehydrogenase activity	2.81E-03
29	GO:0030060: L-malate dehydrogenase activity	3.41E-03
30	GO:0016776: phosphotransferase activity, phosphate group as acceptor	4.05E-03
31	GO:0042578: phosphoric ester hydrolase activity	4.05E-03
32	GO:0008266: poly(U) RNA binding	4.05E-03
33	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.73E-03
34	GO:0048037: cofactor binding	6.16E-03
35	GO:0003993: acid phosphatase activity	6.94E-03
36	GO:0015035: protein disulfide oxidoreductase activity	7.18E-03
37	GO:0051287: NAD binding	7.84E-03
38	GO:0046961: proton-transporting ATPase activity, rotational mechanism	8.59E-03
39	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.00E-02
40	GO:0008080: N-acetyltransferase activity	1.03E-02
41	GO:0016168: chlorophyll binding	1.13E-02
42	GO:0005215: transporter activity	1.20E-02
43	GO:0015297: antiporter activity	1.32E-02
44	GO:0051537: 2 iron, 2 sulfur cluster binding	1.43E-02
45	GO:0004222: metalloendopeptidase activity	1.64E-02
46	GO:0051539: 4 iron, 4 sulfur cluster binding	1.98E-02
47	GO:0008483: transaminase activity	1.98E-02
48	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.21E-02
49	GO:0005198: structural molecule activity	2.72E-02
50	GO:0050661: NADP binding	3.55E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009507: chloroplast	1.52E-16
3	GO:0009941: chloroplast envelope	6.30E-16
4	GO:0009579: thylakoid	9.25E-14
5	GO:0009535: chloroplast thylakoid membrane	1.73E-10
6	GO:0010319: stromule	2.72E-07
7	GO:0010287: plastoglobule	1.24E-06
8	GO:0009534: chloroplast thylakoid	1.24E-06
9	GO:0009570: chloroplast stroma	7.52E-06
10	GO:0009522: photosystem I	4.87E-05
11	GO:0031977: thylakoid lumen	2.40E-04
12	GO:0048046: apoplast	3.02E-04
13	GO:0009538: photosystem I reaction center	1.32E-03
14	GO:0009706: chloroplast inner membrane	1.38E-03
15	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	2.81E-03
16	GO:0016020: membrane	6.23E-03
17	GO:0009543: chloroplast thylakoid lumen	7.75E-03
18	GO:0042651: thylakoid membrane	7.75E-03
19	GO:0009536: plastid	1.59E-02
20	GO:0009523: photosystem II	2.10E-02