co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G012970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007049: cell cycle	6.52E-10
2	GO:0006260: DNA replication	1.19E-07
3	GO:0016572: histone phosphorylation	1.19E-06
4	GO:0043987: histone H3-S10 phosphorylation	1.25E-06
5	GO:0051301: cell division	1.50E-05
6	GO:0051726: regulation of cell cycle	1.14E-04
7	GO:0042276: error-prone translesion synthesis	1.67E-04
8	GO:1990426: mitotic recombination-dependent replication fork processing	1.67E-04
9	GO:0006259: DNA metabolic process	1.69E-04
10	GO:0010389: regulation of G2/M transition of mitotic cell cycle	2.56E-04
11	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.59E-04
12	GO:0009755: hormone-mediated signaling pathway	4.07E-04
13	GO:0018279: protein N-linked glycosylation via asparagine	4.07E-04
14	GO:0009956: radial pattern formation	4.07E-04
15	GO:0009186: deoxyribonucleoside diphosphate metabolic process	4.07E-04
16	GO:0009966: regulation of signal transduction	5.47E-04
17	GO:0022904: respiratory electron transport chain	6.97E-04
18	GO:0008356: asymmetric cell division	1.04E-03
19	GO:0006275: regulation of DNA replication	1.15E-03
20	GO:0006265: DNA topological change	1.40E-03
21	GO:0006281: DNA repair	1.68E-03
22	GO:0055072: iron ion homeostasis	2.21E-03
23	GO:0009934: regulation of meristem structural organization	2.21E-03
24	GO:0006084: acetyl-CoA metabolic process	2.21E-03
25	GO:0010583: response to cyclopentenone	2.21E-03
26	GO:0048449: floral organ formation	2.66E-03
27	GO:0010074: maintenance of meristem identity	2.66E-03
28	GO:0006302: double-strand break repair	3.15E-03
29	GO:0061025: membrane fusion	3.15E-03
30	GO:0007018: microtubule-based movement	3.56E-03
31	GO:0010048: vernalization response	4.24E-03
32	GO:0012501: programmed cell death	4.24E-03
33	GO:0016570: histone modification	4.24E-03
34	GO:0019915: lipid storage	4.81E-03
35	GO:0051225: spindle assembly	4.81E-03
36	GO:0016571: histone methylation	5.40E-03
37	GO:0010332: response to gamma radiation	5.40E-03
38	GO:0032508: DNA duplex unwinding	5.40E-03
39	GO:0006487: protein N-linked glycosylation	6.03E-03
40	GO:0006406: mRNA export from nucleus	6.03E-03
41	GO:0009607: response to biotic stimulus	6.03E-03
42	GO:0009909: regulation of flower development	6.45E-03
43	GO:0010162: seed dormancy process	6.69E-03
44	GO:0050826: response to freezing	7.37E-03
45	GO:0016126: sterol biosynthetic process	8.06E-03
46	GO:0000724: double-strand break repair via homologous recombination	8.06E-03
47	GO:0006914: autophagy	8.06E-03
48	GO:0008219: cell death	8.79E-03
49	GO:0006310: DNA recombination	8.79E-03
50	GO:0010182: sugar mediated signaling pathway	1.03E-02
51	GO:0009845: seed germination	1.27E-02
52	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	1.36E-02
53	GO:0009933: meristem structural organization	1.44E-02
54	GO:0006270: DNA replication initiation	1.53E-02
55	GO:0016579: protein deubiquitination	1.72E-02
56	GO:0048366: leaf development	1.81E-02
57	GO:0009086: methionine biosynthetic process	1.81E-02
58	GO:0000911: cytokinesis by cell plate formation	2.21E-02
59	GO:0009640: photomorphogenesis	2.42E-02
60	GO:0016311: dephosphorylation	2.53E-02
61	GO:0008283: cell proliferation	2.98E-02
62	GO:0010228: vegetative to reproductive phase transition of meristem	3.10E-02
63	GO:0007275: multicellular organism development	3.58E-02
64	GO:0006952: defense response	4.09E-02
65	GO:0045893: positive regulation of transcription, DNA-templated	4.22E-02
66	GO:0006396: RNA processing	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0008420: CTD phosphatase activity	0.00E+00
2	GO:0035175: histone kinase activity (H3-S10 specific)	1.25E-06
3	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	4.70E-06
4	GO:0000150: recombinase activity	1.67E-04
5	GO:0003916: DNA topoisomerase activity	1.67E-04
6	GO:0030337: DNA polymerase processivity factor activity	1.67E-04
7	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.67E-04
8	GO:0019901: protein kinase binding	4.18E-04
9	GO:0008017: microtubule binding	6.85E-04
10	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.04E-03
11	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.40E-03
12	GO:0008094: DNA-dependent ATPase activity	2.66E-03
13	GO:0003777: microtubule motor activity	3.56E-03
14	GO:0003678: DNA helicase activity	4.24E-03
15	GO:0005484: SNAP receptor activity	4.24E-03
16	GO:0003684: damaged DNA binding	4.24E-03
17	GO:0046914: transition metal ion binding	4.24E-03
18	GO:0003697: single-stranded DNA binding	4.81E-03
19	GO:0003690: double-stranded DNA binding	4.81E-03
20	GO:0016651: oxidoreductase activity, acting on NAD(P)H	7.37E-03
21	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.72E-02
22	GO:0016791: phosphatase activity	2.42E-02
23	GO:0005516: calmodulin binding	2.53E-02
24	GO:0003677: DNA binding	3.29E-02
25	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.46E-02
26	GO:0016881: acid-amino acid ligase activity	3.70E-02
27	GO:0005524: ATP binding	3.96E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005971: ribonucleoside-diphosphate reductase complex	4.70E-06
3	GO:0043626: PCNA complex	1.67E-04
4	GO:0008250: oligosaccharyltransferase complex	4.07E-04
5	GO:0000775: chromosome, centromeric region	6.97E-04
6	GO:0005819: spindle	7.76E-04
7	GO:0012505: endomembrane system	2.21E-03
8	GO:0005634: nucleus	2.21E-03
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.66E-03
10	GO:0042555: MCM complex	3.15E-03
11	GO:0005871: kinesin complex	3.37E-03
12	GO:0005743: mitochondrial inner membrane	3.75E-03
13	GO:0009504: cell plate	8.06E-03
14	GO:0031966: mitochondrial membrane	8.79E-03
15	GO:0005874: microtubule	9.02E-03
16	GO:0005635: nuclear envelope	1.27E-02
17	GO:0005694: chromosome	1.40E-02
18	GO:0009524: phragmoplast	1.72E-02
19	GO:0005875: microtubule associated complex	1.91E-02
20	GO:0045271: respiratory chain complex I	2.75E-02
21	GO:0009506: plasmodesma	4.76E-02