Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G011491

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031118: rRNA pseudouridine synthesis0.00E+00
2GO:0070143: mitochondrial alanyl-tRNA aminoacylation0.00E+00
3GO:0006419: alanyl-tRNA aminoacylation0.00E+00
4GO:0048574: long-day photoperiodism, flowering4.21E-05
5GO:0009909: regulation of flower development5.53E-05
6GO:0010638: positive regulation of organelle organization1.97E-04
7GO:0048235: pollen sperm cell differentiation1.97E-04
8GO:0033044: regulation of chromosome organization4.12E-04
9GO:0006414: translational elongation4.45E-04
10GO:0010050: vegetative phase change5.34E-04
11GO:0007267: cell-cell signaling5.34E-04
12GO:0019538: protein metabolic process6.67E-04
13GO:0051604: protein maturation8.11E-04
14GO:0043039: tRNA aminoacylation8.11E-04
15GO:0010073: meristem maintenance8.11E-04
16GO:0010074: maintenance of meristem identity8.11E-04
17GO:0048443: stamen development9.62E-04
18GO:0016572: histone phosphorylation9.62E-04
19GO:0006338: chromatin remodeling1.12E-03
20GO:0006499: N-terminal protein myristoylation1.29E-03
21GO:0006312: mitotic recombination1.29E-03
22GO:0009616: virus induced gene silencing1.29E-03
23GO:0019915: lipid storage1.46E-03
24GO:0009165: nucleotide biosynthetic process1.64E-03
25GO:0032508: DNA duplex unwinding1.64E-03
26GO:0031048: chromatin silencing by small RNA1.82E-03
27GO:0048316: seed development1.82E-03
28GO:0006406: mRNA export from nucleus1.82E-03
29GO:0016567: protein ubiquitination1.98E-03
30GO:0006281: DNA repair1.98E-03
31GO:0010014: meristem initiation2.00E-03
32GO:0007131: reciprocal meiotic recombination2.00E-03
33GO:0010162: seed dormancy process2.00E-03
34GO:0009855: determination of bilateral symmetry2.00E-03
35GO:0050826: response to freezing2.19E-03
36GO:0006094: gluconeogenesis2.38E-03
37GO:0034968: histone lysine methylation2.38E-03
38GO:0010267: production of ta-siRNAs involved in RNA interference2.58E-03
39GO:0035196: production of miRNAs involved in gene silencing by miRNA2.58E-03
40GO:0044267: cellular protein metabolic process2.58E-03
41GO:0010182: sugar mediated signaling pathway3.01E-03
42GO:0010090: trichome morphogenesis3.01E-03
43GO:0006346: methylation-dependent chromatin silencing3.25E-03
44GO:0009845: seed germination3.73E-03
45GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation3.98E-03
46GO:0009560: embryo sac egg cell differentiation4.50E-03
47GO:0001510: RNA methylation4.50E-03
48GO:0016579: protein deubiquitination5.01E-03
49GO:0009086: methionine biosynthetic process5.27E-03
50GO:0051567: histone H3-K9 methylation6.72E-03
51GO:0009640: photomorphogenesis7.02E-03
52GO:0006306: DNA methylation7.33E-03
53GO:0000398: mRNA splicing, via spliceosome7.95E-03
54GO:0008283: cell proliferation8.60E-03
55GO:0010228: vegetative to reproductive phase transition of meristem8.93E-03
56GO:0006952: defense response1.17E-02
57GO:0006334: nucleosome assembly2.08E-02
58GO:0006096: glycolytic process2.27E-02
59GO:0009793: embryo development ending in seed dormancy3.73E-02
60GO:0006355: regulation of transcription, DNA-templated4.51E-02
61GO:0006457: protein folding4.80E-02
RankGO TermAdjusted P value
1GO:0004813: alanine-tRNA ligase activity0.00E+00
2GO:0008242: omega peptidase activity2.99E-04
3GO:0030515: snoRNA binding2.99E-04
4GO:0003746: translation elongation factor activity3.18E-04
5GO:0016876: ligase activity, forming aminoacyl-tRNA and related compounds4.12E-04
6GO:0003729: mRNA binding5.34E-04
7GO:0000049: tRNA binding1.12E-03
8GO:0003697: single-stranded DNA binding1.46E-03
9GO:0003690: double-stranded DNA binding1.46E-03
10GO:0003676: nucleic acid binding1.88E-03
11GO:0005200: structural constituent of cytoskeleton2.79E-03
12GO:0003723: RNA binding4.57E-03
13GO:0008234: cysteine-type peptidase activity7.64E-03
14GO:0004842: ubiquitin-protein transferase activity1.64E-02
15GO:0051082: unfolded protein binding1.90E-02
16GO:0046982: protein heterodimerization activity2.71E-02
17GO:0003677: DNA binding2.95E-02
18GO:0016874: ligase activity4.62E-02
RankGO TermAdjusted P value
1GO:0000812: Swr1 complex0.00E+00
2GO:0005730: nucleolus2.31E-06
3GO:0015030: Cajal body5.67E-06
4GO:0035267: NuA4 histone acetyltransferase complex4.21E-05
5GO:0005654: nucleoplasm7.58E-05
6GO:0019013: viral nucleocapsid9.95E-05
7GO:0005732: small nucleolar ribonucleoprotein complex4.12E-04
8GO:0031011: Ino80 complex5.34E-04
9GO:0000151: ubiquitin ligase complex1.46E-03
10GO:0030529: intracellular ribonucleoprotein complex2.54E-03
11GO:0005634: nucleus1.67E-02
12GO:0000786: nucleosome1.90E-02
13GO:0005694: chromosome2.41E-02
14GO:0005618: cell wall3.57E-02