co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G010328

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030494: bacteriochlorophyll biosynthetic process	0.00E+00
2	GO:0009658: chloroplast organization	4.49E-07
3	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.20E-05
4	GO:0010027: thylakoid membrane organization	1.06E-04
5	GO:0006433: prolyl-tRNA aminoacylation	2.06E-04
6	GO:0071722: detoxification of arsenic-containing substance	2.06E-04
7	GO:0042793: transcription from plastid promoter	4.09E-04
8	GO:0044272: sulfur compound biosynthetic process	4.95E-04
9	GO:0051555: flavonol biosynthetic process	4.95E-04
10	GO:0010109: regulation of photosynthesis	4.95E-04
11	GO:0006733: oxidoreduction coenzyme metabolic process	8.44E-04
12	GO:0006431: methionyl-tRNA aminoacylation	8.44E-04
13	GO:0009247: glycolipid biosynthetic process	8.44E-04
14	GO:0006571: tyrosine biosynthetic process	8.44E-04
15	GO:0035304: regulation of protein dephosphorylation	9.26E-04
16	GO:0009695: jasmonic acid biosynthetic process	1.04E-03
17	GO:0030259: lipid glycosylation	1.25E-03
18	GO:0019216: regulation of lipid metabolic process	1.25E-03
19	GO:0009117: nucleotide metabolic process	1.25E-03
20	GO:0045037: protein import into chloroplast stroma	1.25E-03
21	GO:0006353: DNA-templated transcription, termination	1.25E-03
22	GO:0019375: galactolipid biosynthetic process	1.25E-03
23	GO:0045038: protein import into chloroplast thylakoid membrane	1.25E-03
24	GO:0009902: chloroplast relocation	1.52E-03
25	GO:0000096: sulfur amino acid metabolic process	1.69E-03
26	GO:0009813: flavonoid biosynthetic process	1.69E-03
27	GO:0019748: secondary metabolic process	1.69E-03
28	GO:0010468: regulation of gene expression	1.69E-03
29	GO:0006633: fatty acid biosynthetic process	1.78E-03
30	GO:0019344: cysteine biosynthetic process	2.08E-03
31	GO:0016117: carotenoid biosynthetic process	2.08E-03
32	GO:0006102: isocitrate metabolic process	2.15E-03
33	GO:0031347: regulation of defense response	2.15E-03
34	GO:0010206: photosystem II repair	2.65E-03
35	GO:0010413: glucuronoxylan metabolic process	2.65E-03
36	GO:0019538: protein metabolic process	2.65E-03
37	GO:0009106: lipoate metabolic process	2.65E-03
38	GO:0010205: photoinhibition	2.65E-03
39	GO:0032880: regulation of protein localization	2.65E-03
40	GO:0006766: vitamin metabolic process	2.65E-03
41	GO:0009108: coenzyme biosynthetic process	2.65E-03
42	GO:0048481: plant ovule development	2.92E-03
43	GO:0006418: tRNA aminoacylation for protein translation	3.12E-03
44	GO:0010099: regulation of photomorphogenesis	3.21E-03
45	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.82E-03
46	GO:0045087: innate immune response	3.82E-03
47	GO:0009072: aromatic amino acid family metabolic process	3.82E-03
48	GO:0015995: chlorophyll biosynthetic process	4.21E-03
49	GO:0009955: adaxial/abaxial pattern specification	4.46E-03
50	GO:0000302: response to reactive oxygen species	4.46E-03
51	GO:0009834: plant-type secondary cell wall biogenesis	4.46E-03
52	GO:0045492: xylan biosynthetic process	5.81E-03
53	GO:0006546: glycine catabolic process	5.81E-03
54	GO:0009612: response to mechanical stimulus	6.54E-03
55	GO:0019722: calcium-mediated signaling	6.54E-03
56	GO:0045893: positive regulation of transcription, DNA-templated	6.89E-03
57	GO:0031408: oxylipin biosynthetic process	7.31E-03
58	GO:0048316: seed development	7.31E-03
59	GO:0006655: phosphatidylglycerol biosynthetic process	7.31E-03
60	GO:0009416: response to light stimulus	8.50E-03
61	GO:0030154: cell differentiation	9.77E-03
62	GO:0006094: gluconeogenesis	9.77E-03
63	GO:0019684: photosynthesis, light reaction	9.77E-03
64	GO:0010155: regulation of proton transport	1.06E-02
65	GO:0008610: lipid biosynthetic process	1.06E-02
66	GO:0009627: systemic acquired resistance	1.15E-02
67	GO:0046777: protein autophosphorylation	1.25E-02
68	GO:0009553: embryo sac development	1.34E-02
69	GO:0009620: response to fungus	1.34E-02
70	GO:0042254: ribosome biogenesis	1.54E-02
71	GO:0009846: pollen germination	1.65E-02
72	GO:0030163: protein catabolic process	1.86E-02
73	GO:0006364: rRNA processing	1.95E-02
74	GO:0006508: proteolysis	1.95E-02
75	GO:0009220: pyrimidine ribonucleotide biosynthetic process	2.09E-02
76	GO:0009073: aromatic amino acid family biosynthetic process	2.09E-02
77	GO:0009637: response to blue light	2.20E-02
78	GO:0019761: glucosinolate biosynthetic process	2.32E-02
79	GO:0009790: embryo development	2.32E-02
80	GO:0006099: tricarboxylic acid cycle	2.44E-02
81	GO:0010114: response to red light	2.44E-02
82	GO:0016226: iron-sulfur cluster assembly	2.56E-02
83	GO:0010218: response to far red light	2.69E-02
84	GO:0009744: response to sucrose	3.21E-02
85	GO:0009793: embryo development ending in seed dormancy	3.40E-02
86	GO:0030244: cellulose biosynthetic process	3.48E-02
87	GO:0008652: cellular amino acid biosynthetic process	3.62E-02
88	GO:0009644: response to high light intensity	3.76E-02
89	GO:0010228: vegetative to reproductive phase transition of meristem	3.76E-02
90	GO:0006200: obsolete ATP catabolic process	4.05E-02
91	GO:0009965: leaf morphogenesis	4.20E-02
92	GO:0010207: photosystem II assembly	4.65E-02
93	GO:0006457: protein folding	4.83E-02
94	GO:0009753: response to jasmonic acid	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0046408: chlorophyll synthetase activity	0.00E+00
2	GO:0045431: flavonol synthase activity	0.00E+00
3	GO:0004252: serine-type endopeptidase activity	1.06E-04
4	GO:0035250: UDP-galactosyltransferase activity	2.06E-04
5	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	2.06E-04
6	GO:0031177: phosphopantetheine binding	2.06E-04
7	GO:0008194: UDP-glycosyltransferase activity	2.06E-04
8	GO:0004827: proline-tRNA ligase activity	2.06E-04
9	GO:0019239: deaminase activity	4.95E-04
10	GO:0008977: prephenate dehydrogenase (NAD+) activity	4.95E-04
11	GO:0004665: prephenate dehydrogenase (NADP+) activity	4.95E-04
12	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.95E-04
13	GO:0045485: omega-6 fatty acid desaturase activity	4.95E-04
14	GO:0004825: methionine-tRNA ligase activity	8.44E-04
15	GO:0032549: ribonucleoside binding	8.44E-04
16	GO:0000774: adenyl-nucleotide exchange factor activity	8.44E-04
17	GO:0004659: prenyltransferase activity	1.25E-03
18	GO:0019843: rRNA binding	1.39E-03
19	GO:0051087: chaperone binding	3.21E-03
20	GO:0004812: aminoacyl-tRNA ligase activity	3.54E-03
21	GO:0008266: poly(U) RNA binding	3.82E-03
22	GO:0016746: transferase activity, transferring acyl groups	5.73E-03
23	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.29E-03
24	GO:0004527: exonuclease activity	8.09E-03
25	GO:0016760: cellulose synthase (UDP-forming) activity	8.09E-03
26	GO:0031072: heat shock protein binding	1.34E-02
27	GO:0042802: identical protein binding	1.86E-02
28	GO:0030246: carbohydrate binding	3.62E-02
29	GO:0016758: transferase activity, transferring hexosyl groups	3.62E-02
30	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.76E-02
31	GO:0042803: protein homodimerization activity	4.05E-02
32	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.20E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.71E-11
2	GO:0009941: chloroplast envelope	4.24E-09
3	GO:0009570: chloroplast stroma	5.55E-09
4	GO:0009532: plastid stroma	1.04E-04
5	GO:0080085: signal recognition particle, chloroplast targeting	2.06E-04
6	GO:0009535: chloroplast thylakoid membrane	2.96E-04
7	GO:0009533: chloroplast stromal thylakoid	4.95E-04
8	GO:0009706: chloroplast inner membrane	1.27E-03
9	GO:0009840: chloroplastic endopeptidase Clp complex	1.69E-03
10	GO:0009579: thylakoid	2.18E-03
11	GO:0009536: plastid	2.96E-03
12	GO:0009534: chloroplast thylakoid	4.21E-03
13	GO:0009295: nucleoid	5.81E-03
14	GO:0030529: intracellular ribonucleoprotein complex	9.30E-03
15	GO:0005759: mitochondrial matrix	1.75E-02
16	GO:0010319: stromule	2.44E-02
17	GO:0022626: cytosolic ribosome	3.94E-02