Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G007486

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080029: cellular response to boron-containing substance levels0.00E+00
2GO:0009150: purine ribonucleotide metabolic process0.00E+00
3GO:0042273: ribosomal large subunit biogenesis0.00E+00
4GO:0010036: response to boron-containing substance0.00E+00
5GO:0060148: positive regulation of posttranscriptional gene silencing0.00E+00
6GO:0006144: purine nucleobase metabolic process0.00E+00
7GO:0045694: regulation of embryo sac egg cell differentiation0.00E+00
8GO:0019628: urate catabolic process0.00E+00
9GO:0000165: MAPK cascade3.70E-04
10GO:0009168: purine ribonucleoside monophosphate biosynthetic process4.06E-04
11GO:0032264: IMP salvage4.06E-04
12GO:0019427: acetyl-CoA biosynthetic process from acetate4.06E-04
13GO:0071918: urea transmembrane transport4.06E-04
14GO:0009743: response to carbohydrate4.06E-04
15GO:0015793: glycerol transport4.06E-04
16GO:0007112: male meiosis cytokinesis4.06E-04
17GO:0006886: intracellular protein transport5.86E-04
18GO:0030643: cellular phosphate ion homeostasis9.49E-04
19GO:0010109: regulation of photosynthesis9.49E-04
20GO:0035445: borate transmembrane transport9.49E-04
21GO:0006083: acetate metabolic process9.49E-04
22GO:0010106: cellular response to iron ion starvation9.49E-04
23GO:0034389: lipid particle organization9.49E-04
24GO:0046713: borate transport9.49E-04
25GO:0015700: arsenite transport9.49E-04
26GO:0006833: water transport1.45E-03
27GO:0007165: signal transduction1.56E-03
28GO:0006188: IMP biosynthetic process1.60E-03
29GO:0010152: pollen maturation1.60E-03
30GO:0006491: N-glycan processing1.60E-03
31GO:0000303: response to superoxide1.60E-03
32GO:0045727: positive regulation of translation1.60E-03
33GO:0006913: nucleocytoplasmic transport2.09E-03
34GO:0042256: mature ribosome assembly2.32E-03
35GO:0016485: protein processing2.32E-03
36GO:0006790: sulfur compound metabolic process2.32E-03
37GO:0070084: protein initiator methionine removal3.14E-03
38GO:0009873: ethylene-activated signaling pathway3.14E-03
39GO:0006081: cellular aldehyde metabolic process3.14E-03
40GO:0016579: protein deubiquitination4.89E-03
41GO:0009987: cellular process5.06E-03
42GO:0006084: acetyl-CoA metabolic process5.06E-03
43GO:0010167: response to nitrate5.06E-03
44GO:0030422: production of siRNA involved in RNA interference5.06E-03
45GO:0015706: nitrate transport5.06E-03
46GO:0010025: wax biosynthetic process5.06E-03
47GO:0006367: transcription initiation from RNA polymerase II promoter5.06E-03
48GO:0046685: response to arsenic-containing substance5.06E-03
49GO:0016132: brassinosteroid biosynthetic process5.06E-03
50GO:0010311: lateral root formation6.14E-03
51GO:0010074: maintenance of meristem identity6.14E-03
52GO:0010310: regulation of hydrogen peroxide metabolic process6.14E-03
53GO:0009615: response to virus6.14E-03
54GO:0007031: peroxisome organization6.14E-03
55GO:0000741: karyogamy6.14E-03
56GO:0006002: fructose 6-phosphate metabolic process7.30E-03
57GO:0007264: small GTPase mediated signal transduction7.60E-03
58GO:0006826: iron ion transport8.51E-03
59GO:0006096: glycolytic process8.87E-03
60GO:0006312: mitotic recombination9.80E-03
61GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.11E-02
62GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.11E-02
63GO:0019915: lipid storage1.11E-02
64GO:0009266: response to temperature stimulus1.26E-02
65GO:0016571: histone methylation1.26E-02
66GO:0010389: regulation of G2/M transition of mitotic cell cycle1.26E-02
67GO:0007033: vacuole organization1.26E-02
68GO:0015031: protein transport1.27E-02
69GO:0006406: mRNA export from nucleus1.40E-02
70GO:0051607: defense response to virus1.40E-02
71GO:0010162: seed dormancy process1.56E-02
72GO:0007030: Golgi organization1.56E-02
73GO:0015996: chlorophyll catabolic process1.56E-02
74GO:0006972: hyperosmotic response1.72E-02
75GO:0050826: response to freezing1.72E-02
76GO:0009749: response to glucose1.88E-02
77GO:0016126: sterol biosynthetic process1.88E-02
78GO:0009269: response to desiccation2.06E-02
79GO:0009793: embryo development ending in seed dormancy2.16E-02
80GO:0006612: protein targeting to membrane2.23E-02
81GO:0010363: regulation of plant-type hypersensitive response2.41E-02
82GO:0035304: regulation of protein dephosphorylation2.41E-02
83GO:0010182: sugar mediated signaling pathway2.41E-02
84GO:0009867: jasmonic acid mediated signaling pathway2.60E-02
85GO:0009553: embryo sac development2.60E-02
86GO:0031348: negative regulation of defense response2.60E-02
87GO:0009751: response to salicylic acid2.79E-02
88GO:0009738: abscisic acid-activated signaling pathway2.79E-02
89GO:0009845: seed germination2.99E-02
90GO:0035556: intracellular signal transduction2.99E-02
91GO:0042254: ribosome biogenesis2.99E-02
92GO:0006470: protein dephosphorylation3.03E-02
93GO:0009933: meristem structural organization3.40E-02
94GO:0006275: regulation of DNA replication3.40E-02
95GO:0009560: embryo sac egg cell differentiation3.61E-02
96GO:0016192: vesicle-mediated transport4.81E-02
97GO:0016226: iron-sulfur cluster assembly4.98E-02
RankGO TermAdjusted P value
1GO:0035299: inositol pentakisphosphate 2-kinase activity0.00E+00
2GO:0009918: sterol delta7 reductase activity0.00E+00
3GO:0080138: borate uptake transmembrane transporter activity0.00E+00
4GO:0032942: inositol tetrakisphosphate 2-kinase activity0.00E+00
5GO:0004846: urate oxidase activity0.00E+00
6GO:0015168: glycerol transmembrane transporter activity4.06E-04
7GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor4.06E-04
8GO:0003876: AMP deaminase activity4.06E-04
9GO:0015105: arsenite transmembrane transporter activity4.06E-04
10GO:0004708: MAP kinase kinase activity4.06E-04
11GO:0003968: RNA-directed 5'-3' RNA polymerase activity4.06E-04
12GO:0015204: urea transmembrane transporter activity4.06E-04
13GO:0047627: adenylylsulfatase activity4.06E-04
14GO:0043023: ribosomal large subunit binding4.06E-04
15GO:0016208: AMP binding4.06E-04
16GO:0000248: C-5 sterol desaturase activity4.06E-04
17GO:0030742: GTP-dependent protein binding4.06E-04
18GO:0080115: myosin XI tail binding4.06E-04
19GO:0004435: phosphatidylinositol phospholipase C activity4.06E-04
20GO:0019239: deaminase activity9.49E-04
21GO:0046715: borate transmembrane transporter activity9.49E-04
22GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H9.49E-04
23GO:0008430: selenium binding9.49E-04
24GO:0004559: alpha-mannosidase activity9.49E-04
25GO:0015250: water channel activity9.49E-04
26GO:0003987: acetate-CoA ligase activity1.60E-03
27GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity1.60E-03
28GO:0070006: metalloaminopeptidase activity3.14E-03
29GO:0008235: metalloexopeptidase activity4.07E-03
30GO:0004197: cysteine-type endopeptidase activity6.14E-03
31GO:0043022: ribosome binding6.14E-03
32GO:0003872: 6-phosphofructokinase activity8.51E-03
33GO:0004177: aminopeptidase activity8.51E-03
34GO:0031418: L-ascorbic acid binding9.80E-03
35GO:0030955: potassium ion binding9.80E-03
36GO:0004743: pyruvate kinase activity9.80E-03
37GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.11E-02
38GO:0004707: MAP kinase activity1.11E-02
39GO:0042803: protein homodimerization activity1.26E-02
40GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.33E-02
41GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.88E-02
42GO:0008565: protein transporter activity2.60E-02
43GO:0031072: heat shock protein binding2.60E-02
44GO:0003924: GTPase activity3.14E-02
45GO:0051539: 4 iron, 4 sulfur cluster binding3.61E-02
46GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor4.05E-02
RankGO TermAdjusted P value
1GO:0005673: transcription factor TFIIE complex0.00E+00
2GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.06E-04
3GO:0016328: lateral plasma membrane9.49E-04
4GO:0030176: integral component of endoplasmic reticulum membrane9.49E-04
5GO:0005829: cytosol2.82E-03
6GO:0009524: phragmoplast4.89E-03
7GO:0000418: DNA-directed RNA polymerase IV complex5.06E-03
8GO:0005665: DNA-directed RNA polymerase II, core complex6.14E-03
9GO:0005945: 6-phosphofructokinase complex7.30E-03
10GO:0030131: clathrin adaptor complex7.30E-03
11GO:0005681: spliceosomal complex1.11E-02
12GO:0005777: peroxisome1.18E-02
13GO:0005758: mitochondrial intermembrane space1.26E-02
14GO:0030117: membrane coat1.26E-02
15GO:0005794: Golgi apparatus1.50E-02
16GO:0005819: spindle2.60E-02