co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G007038

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0089722: phosphoenolpyruvate transmembrane transport	0.00E+00
2	GO:0010028: xanthophyll cycle	0.00E+00
3	GO:0035436: triose phosphate transmembrane transport	0.00E+00
4	GO:0015714: phosphoenolpyruvate transport	0.00E+00
5	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.04E-07
6	GO:0009106: lipoate metabolic process	3.79E-07
7	GO:0006766: vitamin metabolic process	3.79E-07
8	GO:0009108: coenzyme biosynthetic process	3.79E-07
9	GO:0009773: photosynthetic electron transport in photosystem I	4.65E-07
10	GO:0009072: aromatic amino acid family metabolic process	1.09E-06
11	GO:0010027: thylakoid membrane organization	2.67E-06
12	GO:0006546: glycine catabolic process	3.52E-06
13	GO:0006636: unsaturated fatty acid biosynthetic process	8.39E-06
14	GO:0019216: regulation of lipid metabolic process	1.04E-05
15	GO:0019748: secondary metabolic process	1.97E-05
16	GO:0000096: sulfur amino acid metabolic process	1.97E-05
17	GO:0009695: jasmonic acid biosynthetic process	2.98E-05
18	GO:0009902: chloroplast relocation	5.60E-05
19	GO:0019761: glucosinolate biosynthetic process	1.05E-04
20	GO:0015979: photosynthesis	1.15E-04
21	GO:0000023: maltose metabolic process	1.60E-04
22	GO:0006878: cellular copper ion homeostasis	1.61E-04
23	GO:0006364: rRNA processing	2.65E-04
24	GO:0015995: chlorophyll biosynthetic process	2.71E-04
25	GO:0008652: cellular amino acid biosynthetic process	2.71E-04
26	GO:0042793: transcription from plastid promoter	2.89E-04
27	GO:0006655: phosphatidylglycerol biosynthetic process	2.89E-04
28	GO:0031408: oxylipin biosynthetic process	2.89E-04
29	GO:0043085: positive regulation of catalytic activity	3.40E-04
30	GO:0044272: sulfur compound biosynthetic process	3.93E-04
31	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	3.93E-04
32	GO:0010207: photosystem II assembly	4.48E-04
33	GO:0010155: regulation of proton transport	5.20E-04
34	GO:0010224: response to UV-B	6.61E-04
35	GO:0035304: regulation of protein dephosphorylation	6.61E-04
36	GO:0006733: oxidoreduction coenzyme metabolic process	6.74E-04
37	GO:0007186: G-protein coupled receptor signaling pathway	6.74E-04
38	GO:0019252: starch biosynthetic process	7.55E-04
39	GO:0009595: detection of biotic stimulus	1.00E-03
40	GO:0009117: nucleotide metabolic process	1.00E-03
41	GO:0045037: protein import into chloroplast stroma	1.00E-03
42	GO:0006014: D-ribose metabolic process	1.00E-03
43	GO:0045038: protein import into chloroplast thylakoid membrane	1.00E-03
44	GO:0016485: protein processing	1.00E-03
45	GO:0006098: pentose-phosphate shunt	1.02E-03
46	GO:0000413: protein peptidyl-prolyl isomerization	1.10E-03
47	GO:0009772: photosynthetic electron transport in photosystem II	1.36E-03
48	GO:0009813: flavonoid biosynthetic process	1.36E-03
49	GO:0043900: regulation of multi-organism process	1.36E-03
50	GO:0015994: chlorophyll metabolic process	1.36E-03
51	GO:0070084: protein initiator methionine removal	1.36E-03
52	GO:0070838: divalent metal ion transport	1.36E-03
53	GO:0006796: phosphate-containing compound metabolic process	1.36E-03
54	GO:0016117: carotenoid biosynthetic process	1.52E-03
55	GO:0009637: response to blue light	1.52E-03
56	GO:0019344: cysteine biosynthetic process	1.52E-03
57	GO:0006535: cysteine biosynthetic process from serine	1.74E-03
58	GO:0006568: tryptophan metabolic process	1.74E-03
59	GO:0010114: response to red light	1.76E-03
60	GO:0010218: response to far red light	2.00E-03
61	GO:0010206: photosystem II repair	2.15E-03
62	GO:0034660: ncRNA metabolic process	2.15E-03
63	GO:0006801: superoxide metabolic process	2.15E-03
64	GO:0030003: cellular cation homeostasis	2.15E-03
65	GO:0009987: cellular process	2.15E-03
66	GO:0009411: response to UV	2.15E-03
67	GO:0009744: response to sucrose	2.55E-03
68	GO:0010310: regulation of hydrogen peroxide metabolic process	2.57E-03
69	GO:0048868: pollen tube development	3.04E-03
70	GO:0000162: tryptophan biosynthetic process	3.04E-03
71	GO:0009644: response to high light intensity	3.20E-03
72	GO:0006354: DNA-templated transcription, elongation	4.09E-03
73	GO:0016556: mRNA modification	4.09E-03
74	GO:0009697: salicylic acid biosynthetic process	4.09E-03
75	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.65E-03
76	GO:0009765: photosynthesis, light harvesting	4.65E-03
77	GO:0045893: positive regulation of transcription, DNA-templated	4.97E-03
78	GO:0046854: phosphatidylinositol phosphorylation	5.22E-03
79	GO:0030154: cell differentiation	7.79E-03
80	GO:0009749: response to glucose	7.79E-03
81	GO:0006631: fatty acid metabolic process	7.79E-03
82	GO:0019684: photosynthesis, light reaction	7.79E-03
83	GO:0009966: regulation of signal transduction	8.48E-03
84	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	8.48E-03
85	GO:0006417: regulation of translation	8.48E-03
86	GO:0018298: protein-chromophore linkage	8.48E-03
87	GO:0010103: stomatal complex morphogenesis	9.21E-03
88	GO:0010200: response to chitin	9.21E-03
89	GO:0006612: protein targeting to membrane	9.21E-03
90	GO:0010182: sugar mediated signaling pathway	9.95E-03
91	GO:0010363: regulation of plant-type hypersensitive response	9.95E-03
92	GO:0046777: protein autophosphorylation	9.95E-03
93	GO:0031348: negative regulation of defense response	1.07E-02
94	GO:0009867: jasmonic acid mediated signaling pathway	1.07E-02
95	GO:0000165: MAPK cascade	1.40E-02
96	GO:0009658: chloroplast organization	2.34E-02
97	GO:0030001: metal ion transport	3.11E-02
98	GO:0009965: leaf morphogenesis	3.34E-02
99	GO:0006457: protein folding	3.50E-02
100	GO:0042742: defense response to bacterium	3.89E-02
101	GO:0050832: defense response to fungus	4.20E-02
102	GO:0006508: proteolysis	4.42E-02
103	GO:0009416: response to light stimulus	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
2	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
3	GO:0004802: transketolase activity	0.00E+00
4	GO:0031679: NADH dehydrogenase (plastoquinone) activity	0.00E+00
5	GO:0016532: superoxide dismutase copper chaperone activity	0.00E+00
6	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
7	GO:0009670: triose-phosphate:phosphate antiporter activity	0.00E+00
8	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
9	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	0.00E+00
10	GO:0004618: phosphoglycerate kinase activity	1.61E-04
11	GO:0045430: chalcone isomerase activity	3.93E-04
12	GO:0016872: intramolecular lyase activity	6.74E-04
13	GO:0004747: ribokinase activity	1.00E-03
14	GO:0004124: cysteine synthase activity	1.00E-03
15	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.30E-03
16	GO:0070006: metalloaminopeptidase activity	1.36E-03
17	GO:0008235: metalloexopeptidase activity	1.74E-03
18	GO:0004834: tryptophan synthase activity	1.74E-03
19	GO:0004784: superoxide dismutase activity	2.57E-03
20	GO:0004427: inorganic diphosphatase activity	3.04E-03
21	GO:0008266: poly(U) RNA binding	3.04E-03
22	GO:0004177: aminopeptidase activity	3.56E-03
23	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.56E-03
24	GO:0048037: cofactor binding	4.65E-03
25	GO:0003690: double-stranded DNA binding	4.65E-03
26	GO:0008080: N-acetyltransferase activity	7.79E-03
27	GO:0016168: chlorophyll binding	8.48E-03
28	GO:0004222: metalloendopeptidase activity	1.23E-02
29	GO:0051539: 4 iron, 4 sulfur cluster binding	1.48E-02
30	GO:0009055: electron carrier activity	1.70E-02
31	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.85E-02
32	GO:0008233: peptidase activity	3.89E-02
33	GO:0015035: protein disulfide oxidoreductase activity	3.95E-02
34	GO:0051287: NAD binding	4.20E-02
35	GO:0004252: serine-type endopeptidase activity	4.72E-02
36	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.76E-15
2	GO:0009534: chloroplast thylakoid	4.16E-07
3	GO:0009941: chloroplast envelope	9.17E-07
4	GO:0009535: chloroplast thylakoid membrane	1.28E-06
5	GO:0009543: chloroplast thylakoid lumen	6.44E-06
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.27E-05
7	GO:0009523: photosystem II	7.35E-05
8	GO:0031977: thylakoid lumen	1.31E-04
9	GO:0009528: plastid inner membrane	1.61E-04
10	GO:0042406: extrinsic component of endoplasmic reticulum membrane	1.61E-04
11	GO:0009527: plastid outer membrane	1.61E-04
12	GO:0030093: chloroplast photosystem I	1.61E-04
13	GO:0009579: thylakoid	1.92E-04
14	GO:0009570: chloroplast stroma	4.03E-04
15	GO:0009508: plastid chromosome	1.36E-03
16	GO:0010319: stromule	1.76E-03
17	GO:0009532: plastid stroma	2.57E-03
18	GO:0009295: nucleoid	4.65E-03
19	GO:0009522: photosystem I	9.95E-03
20	GO:0009706: chloroplast inner membrane	1.23E-02
21	GO:0048046: apoplast	1.68E-02
22	GO:0009705: plant-type vacuole membrane	1.85E-02
23	GO:0005739: mitochondrion	4.19E-02