GO Enrichment Analysis of Co-expressed Genes with
GRMZM2G001918
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010157: response to chlorate | 0.00E+00 |
| 2 | GO:0090391: granum assembly | 0.00E+00 |
| 3 | GO:0046653: tetrahydrofolate metabolic process | 0.00E+00 |
| 4 | GO:1901671: positive regulation of superoxide dismutase activity | 0.00E+00 |
| 5 | GO:0010117: photoprotection | 0.00E+00 |
| 6 | GO:0006457: protein folding | 5.05E-12 |
| 7 | GO:0009658: chloroplast organization | 9.45E-06 |
| 8 | GO:0042026: protein refolding | 6.64E-05 |
| 9 | GO:0045037: protein import into chloroplast stroma | 6.64E-05 |
| 10 | GO:0010468: regulation of gene expression | 1.20E-04 |
| 11 | GO:0044267: cellular protein metabolic process | 1.81E-04 |
| 12 | GO:0010206: photosystem II repair | 2.80E-04 |
| 13 | GO:0019538: protein metabolic process | 2.80E-04 |
| 14 | GO:0051512: positive regulation of unidimensional cell growth | 4.80E-04 |
| 15 | GO:0010587: miRNA catabolic process | 4.80E-04 |
| 16 | GO:0009968: negative regulation of signal transduction | 4.80E-04 |
| 17 | GO:0006591: ornithine metabolic process | 4.80E-04 |
| 18 | GO:0043157: response to cation stress | 4.80E-04 |
| 19 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 4.80E-04 |
| 20 | GO:0080141: regulation of jasmonic acid biosynthetic process | 4.80E-04 |
| 21 | GO:0009102: biotin biosynthetic process | 1.12E-03 |
| 22 | GO:0009642: response to light intensity | 1.12E-03 |
| 23 | GO:0019481: L-alanine catabolic process, by transamination | 1.12E-03 |
| 24 | GO:0009081: branched-chain amino acid metabolic process | 1.12E-03 |
| 25 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.88E-03 |
| 26 | GO:0015867: ATP transport | 1.88E-03 |
| 27 | GO:0009409: response to cold | 2.39E-03 |
| 28 | GO:0009627: systemic acquired resistance | 2.64E-03 |
| 29 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.72E-03 |
| 30 | GO:0006790: sulfur compound metabolic process | 2.72E-03 |
| 31 | GO:0006401: RNA catabolic process | 2.72E-03 |
| 32 | GO:0006081: cellular aldehyde metabolic process | 3.72E-03 |
| 33 | GO:0031347: regulation of defense response | 4.81E-03 |
| 34 | GO:0006749: glutathione metabolic process | 4.81E-03 |
| 35 | GO:0006508: proteolysis | 4.89E-03 |
| 36 | GO:0006950: response to stress | 5.09E-03 |
| 37 | GO:0033014: tetrapyrrole biosynthetic process | 5.98E-03 |
| 38 | GO:0006189: 'de novo' IMP biosynthetic process | 5.98E-03 |
| 39 | GO:0032880: regulation of protein localization | 5.98E-03 |
| 40 | GO:0009704: de-etiolation | 5.98E-03 |
| 41 | GO:0009628: response to abiotic stimulus | 7.27E-03 |
| 42 | GO:0051604: protein maturation | 7.27E-03 |
| 43 | GO:0045087: innate immune response | 8.62E-03 |
| 44 | GO:0001666: response to hypoxia | 8.62E-03 |
| 45 | GO:0009407: toxin catabolic process | 1.01E-02 |
| 46 | GO:0000302: response to reactive oxygen species | 1.01E-02 |
| 47 | GO:0046854: phosphatidylinositol phosphorylation | 1.49E-02 |
| 48 | GO:0045036: protein targeting to chloroplast | 1.49E-02 |
| 49 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.66E-02 |
| 50 | GO:0042793: transcription from plastid promoter | 1.66E-02 |
| 51 | GO:0051607: defense response to virus | 1.66E-02 |
| 52 | GO:0048316: seed development | 1.66E-02 |
| 53 | GO:0009408: response to heat | 1.83E-02 |
| 54 | GO:0006261: DNA-dependent DNA replication | 2.04E-02 |
| 55 | GO:0009058: biosynthetic process | 2.14E-02 |
| 56 | GO:0010267: production of ta-siRNAs involved in RNA interference | 2.44E-02 |
| 57 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 2.44E-02 |
| 58 | GO:0008219: cell death | 2.44E-02 |
| 59 | GO:0010155: regulation of proton transport | 2.44E-02 |
| 60 | GO:0071555: cell wall organization | 2.66E-02 |
| 61 | GO:0009416: response to light stimulus | 2.77E-02 |
| 62 | GO:0035304: regulation of protein dephosphorylation | 2.86E-02 |
| 63 | GO:0006139: nucleobase-containing compound metabolic process | 2.86E-02 |
| 64 | GO:0046777: protein autophosphorylation | 2.86E-02 |
| 65 | GO:0009738: abscisic acid-activated signaling pathway | 3.31E-02 |
| 66 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.60E-02 |
| 67 | GO:0009853: photorespiration | 3.79E-02 |
| 68 | GO:0006633: fatty acid biosynthetic process | 3.99E-02 |
| 69 | GO:0009902: chloroplast relocation | 4.03E-02 |
| 70 | GO:0006520: cellular amino acid metabolic process | 4.03E-02 |
| 71 | GO:0006626: protein targeting to mitochondrion | 4.03E-02 |
| 72 | GO:0030163: protein catabolic process | 4.29E-02 |
| 73 | GO:0048573: photoperiodism, flowering | 4.54E-02 |
| 74 | GO:0006184: obsolete GTP catabolic process | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 2 | GO:0008864: formyltetrahydrofolate deformylase activity | 0.00E+00 |
| 3 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 4 | GO:0000774: adenyl-nucleotide exchange factor activity | 2.94E-05 |
| 5 | GO:0046914: transition metal ion binding | 3.16E-05 |
| 6 | GO:0004252: serine-type endopeptidase activity | 1.04E-04 |
| 7 | GO:0042803: protein homodimerization activity | 3.35E-04 |
| 8 | GO:0005507: copper ion binding | 3.55E-04 |
| 9 | GO:0051087: chaperone binding | 3.84E-04 |
| 10 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.80E-04 |
| 11 | GO:0004362: glutathione-disulfide reductase activity | 4.80E-04 |
| 12 | GO:0004585: ornithine carbamoyltransferase activity | 4.80E-04 |
| 13 | GO:0004418: hydroxymethylbilane synthase activity | 4.80E-04 |
| 14 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 4.80E-04 |
| 15 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.43E-04 |
| 16 | GO:0052655: L-valine transaminase activity | 1.12E-03 |
| 17 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.12E-03 |
| 18 | GO:0052654: L-leucine transaminase activity | 1.12E-03 |
| 19 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.12E-03 |
| 20 | GO:0019204: obsolete nucleotide phosphatase activity | 1.12E-03 |
| 21 | GO:0005347: ATP transmembrane transporter activity | 1.12E-03 |
| 22 | GO:0052656: L-isoleucine transaminase activity | 1.12E-03 |
| 23 | GO:0051082: unfolded protein binding | 1.67E-03 |
| 24 | GO:0016743: carboxyl- or carbamoyltransferase activity | 1.88E-03 |
| 25 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 2.72E-03 |
| 26 | GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | 2.72E-03 |
| 27 | GO:0003887: DNA-directed DNA polymerase activity | 7.27E-03 |
| 28 | GO:0008408: 3'-5' exonuclease activity | 8.62E-03 |
| 29 | GO:0008266: poly(U) RNA binding | 8.62E-03 |
| 30 | GO:0003690: double-stranded DNA binding | 1.32E-02 |
| 31 | GO:0008233: peptidase activity | 1.46E-02 |
| 32 | GO:0004650: polygalacturonase activity | 1.85E-02 |
| 33 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.85E-02 |
| 34 | GO:0016746: transferase activity, transferring acyl groups | 1.87E-02 |
| 35 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.23E-02 |
| 36 | GO:0051536: iron-sulfur cluster binding | 2.45E-02 |
| 37 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.08E-02 |
| 38 | GO:0031072: heat shock protein binding | 3.08E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 3.72E-02 |
| 40 | GO:0016597: amino acid binding | 3.79E-02 |
| 41 | GO:0008483: transaminase activity | 4.29E-02 |
| 42 | GO:0042802: identical protein binding | 4.29E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 4.54E-02 |
| 44 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009526: plastid envelope | 0.00E+00 |
| 2 | GO:0042646: plastid nucleoid | 0.00E+00 |
| 3 | GO:0055035: plastid thylakoid membrane | 0.00E+00 |
| 4 | GO:0009941: chloroplast envelope | 5.05E-19 |
| 5 | GO:0009570: chloroplast stroma | 2.66E-14 |
| 6 | GO:0009507: chloroplast | 5.50E-12 |
| 7 | GO:0009532: plastid stroma | 9.89E-08 |
| 8 | GO:0009579: thylakoid | 2.75E-06 |
| 9 | GO:0009707: chloroplast outer membrane | 1.20E-04 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 2.45E-04 |
| 11 | GO:0019867: outer membrane | 4.80E-04 |
| 12 | GO:0080085: signal recognition particle, chloroplast targeting | 4.80E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 1.12E-03 |
| 14 | GO:0048046: apoplast | 3.15E-03 |
| 15 | GO:0009840: chloroplastic endopeptidase Clp complex | 3.72E-03 |
| 16 | GO:0005739: mitochondrion | 4.51E-03 |
| 17 | GO:0005759: mitochondrial matrix | 4.86E-03 |
| 18 | GO:0009536: plastid | 4.96E-03 |
| 19 | GO:0010319: stromule | 7.81E-03 |
| 20 | GO:0042651: thylakoid membrane | 1.66E-02 |
| 21 | GO:0009706: chloroplast inner membrane | 3.55E-02 |
| 22 | GO:0005737: cytoplasm | 3.69E-02 |